RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 EIF2B2P49770 351 aaKnown RBP11.56□□□□□ -0.56
CUX2-202ENST00000397643 ZNF709Q8N972 641 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 BPIFCQ8NFQ6 507 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 OR51G1Q8NGK1 321 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 MGST2Q99735 147 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 WDR61Q9GZS3 305 aaKnown RBP11.56□□□□□ -0.56
CUX2-202ENST00000397643 CLEC5AQ9NY25 188 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 RABAC1Q9UI14 185 aa11.56□□□□□ -0.56
CUX2-202ENST00000397643 BORCS7-ASMTA0A0B4J1R7 106 aa11.55□□□□□ -0.56
CUX2-202ENST00000397643 CXCL2P19875 107 aa11.55□□□□□ -0.56
CUX2-202ENST00000397643 GRAMD2BQ96HH9 432 aa11.55□□□□□ -0.56
CUX2-202ENST00000397643 NDUFAF3Q9BU61 184 aa11.55□□□□□ -0.56
CUX2-202ENST00000397643 PARD6GQ9BYG4 376 aaPredicted RBP11.55□□□□□ -0.56
CUX2-202ENST00000397643 SLC45A2Q9UMX9 530 aa11.55□□□□□ -0.56
CUX2-202ENST00000397643 KANTRA0A1W2PQU2 76 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 C17orf112F2Z3M2 114 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 IL4P05112 153 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 ZNF688P0C7X2 276 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 RPL11P62913 178 aaKnown RBP11.54□□□□□ -0.56
CUX2-202ENST00000397643 TMUB2Q71RG4 321 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 DCANP1Q8TF63 244 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 ARPC5LQ9BPX5 153 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 ARL6Q9H0F7 186 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 KCNIP2Q9NS61 270 aa11.54□□□□□ -0.56
CUX2-202ENST00000397643 GATA2P23769 480 aaPredicted RBP11.53□□□□□ -0.56
CUX2-202ENST00000397643 RPL29P47914 159 aaKnown RBP11.53□□□□□ -0.56
CUX2-202ENST00000397643 LYZP61626 148 aa11.53□□□□□ -0.56
CUX2-202ENST00000397643 OPCMLQ14982 345 aa11.53□□□□□ -0.56
CUX2-202ENST00000397643 STXBP6Q8NFX7 210 aa11.53□□□□□ -0.56
CUX2-202ENST00000397643 RNF125Q96EQ8 232 aa11.53□□□□□ -0.56
CUX2-202ENST00000397643 METTL26Q96S19 204 aa11.53□□□□□ -0.56
CUX2-202ENST00000397643 PBDC1Q9BVG4 233 aa11.53□□□□□ -0.56
CUX2-202ENST00000397643 NPCDR1Q9BY65 106 aa11.53□□□□□ -0.56
CUX2-202ENST00000397643 PFDN2Q9UHV9 154 aa11.53□□□□□ -0.56
CUX2-202ENST00000397643 IGLV2-18A0A075B6J9 118 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 BCL2L11O43521 198 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 LINC00869P0C866 280 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 NPPCP23582 126 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 S100A7P31151 101 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 LGALSLQ3ZCW2 172 aaPredicted RBP11.52□□□□□ -0.57
CUX2-202ENST00000397643 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 PXDC1Q5TGL8 231 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 RPL7L1Q6DKI1 246 aaKnown RBP11.52□□□□□ -0.57
CUX2-202ENST00000397643 TMEM182Q6ZP80 229 aaPredicted RBP11.52□□□□□ -0.57
CUX2-202ENST00000397643 Q6ZRG5 221 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 NARS2Q96I59 477 aaKnown RBP11.52□□□□□ -0.57
CUX2-202ENST00000397643 TMEM231Q9H6L2 316 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 PXMP4Q9Y6I8 212 aa11.52□□□□□ -0.57
CUX2-202ENST00000397643 ORM2P19652 201 aa11.51□□□□□ -0.57
CUX2-202ENST00000397643 CRYBB3P26998 211 aa11.51□□□□□ -0.57
CUX2-202ENST00000397643 USF2Q15853 346 aaPredicted RBP11.51□□□□□ -0.57
CUX2-202ENST00000397643 MIC13Q5XKP0 118 aa11.51□□□□□ -0.57
CUX2-202ENST00000397643 S100A7AQ86SG5 101 aa11.51□□□□□ -0.57
CUX2-202ENST00000397643 OR1B1Q8NGR6 318 aa11.51□□□□□ -0.57
CUX2-202ENST00000397643 CYTL1Q9NRR1 136 aa11.51□□□□□ -0.57
CUX2-202ENST00000397643 SLC39A9Q9NUM3 307 aa11.51□□□□□ -0.57
CUX2-202ENST00000397643 PLA2G2EQ9NZK7 142 aa11.51□□□□□ -0.57
CUX2-202ENST00000397643 APOBP04114 4563 aaKnown RBP11.51□□□□□ -0.57
CUX2-202ENST00000397643 A0A1W2PS18 150 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 HYPMO75409 117 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
CUX2-202ENST00000397643 PLP1P60201 277 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 B2MP61769 119 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 EIF5AP63241 154 aaKnown RBP11.5□□□□□ -0.57
CUX2-202ENST00000397643 C9orf62Q8N4C0 152 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 HSD17B11Q8NBQ5 300 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 GNPNAT1Q96EK6 184 aaPredicted RBP11.5□□□□□ -0.57
CUX2-202ENST00000397643 RSG1Q9BU20 258 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 ZNF471Q9BX82 626 aaPredicted RBP11.5□□□□□ -0.57
CUX2-202ENST00000397643 TIMM9Q9Y5J7 89 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 NACAE9PAV3 2078 aa11.5□□□□□ -0.57
CUX2-202ENST00000397643 COX7A2P2O60397 106 aa11.49□□□□□ -0.57
CUX2-202ENST00000397643 OR5G3P0C626 314 aa11.49□□□□□ -0.57
CUX2-202ENST00000397643 OR1L4Q8NGR5 311 aa11.49□□□□□ -0.57
CUX2-202ENST00000397643 PPP1R14BQ96C90 147 aa11.49□□□□□ -0.57
CUX2-202ENST00000397643 DOK5Q9P104 306 aa11.49□□□□□ -0.57
CUX2-202ENST00000397643 HIGD1AQ9Y241 93 aa11.49□□□□□ -0.57
CUX2-202ENST00000397643 ATP6V0CP27449 155 aa11.48□□□□□ -0.57
CUX2-202ENST00000397643 NKX2-5P52952 324 aaPredicted RBP11.48□□□□□ -0.57
CUX2-202ENST00000397643 FFAR4Q5NUL3 377 aa11.48□□□□□ -0.57
CUX2-202ENST00000397643 PFDN5Q99471 154 aa11.48□□□□□ -0.57
CUX2-202ENST00000397643 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
CUX2-202ENST00000397643 DNAJC4Q9NNZ3 241 aa11.48□□□□□ -0.57
CUX2-202ENST00000397643 DNAH5Q8TE73 4624 aa11.47□□□□□ -0.57
CUX2-202ENST00000397643 PSMG4Q5JS54 123 aa11.47□□□□□ -0.57
CUX2-202ENST00000397643 C10orf113Q5VZT2 155 aa11.47□□□□□ -0.57
CUX2-202ENST00000397643 ARV1Q9H2C2 271 aa11.47□□□□□ -0.57
CUX2-202ENST00000397643 XCL2Q9UBD3 114 aa11.47□□□□□ -0.57
CUX2-202ENST00000397643 RNF24Q9Y225 148 aa11.47□□□□□ -0.57
CUX2-202ENST00000397643 U3KQE9 123 aa11.47□□□□□ -0.57
CUX2-202ENST00000397643 CDK2AP2O75956 126 aa11.46□□□□□ -0.57
CUX2-202ENST00000397643 TPT1P13693 172 aaKnown RBP11.46□□□□□ -0.57
CUX2-202ENST00000397643 SERF2P84101 59 aa11.46□□□□□ -0.57
CUX2-202ENST00000397643 ACOT6Q3I5F7 207 aaPredicted RBP11.46□□□□□ -0.57
CUX2-202ENST00000397643 PATE2Q6UY27 113 aa11.46□□□□□ -0.57
CUX2-202ENST00000397643 ZNF705AQ6ZN79 300 aaPredicted RBP11.46□□□□□ -0.57
CUX2-202ENST00000397643 SLC51BQ86UW2 128 aa11.46□□□□□ -0.57
CUX2-202ENST00000397643 UBE2DNLQ8IWF7 75 aa11.46□□□□□ -0.57
CUX2-202ENST00000397643 OR2G3Q8NGZ4 309 aa11.46□□□□□ -0.57
CUX2-202ENST00000397643 GLMPQ8WWB7 406 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 198.6 ms