RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SLC25A22Q9H936 323 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 LINC00588Q9Y4M8 146 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 DMBT1Q9UGM3 2413 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-208ENST00000397204 DUXBA0A1W2PPF3 345 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 ANKRD20A5PA0PJZ0 165 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 M0R2Z0 102 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 MED6O75586 246 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 SLC25A6P12236 298 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 ORM2P19652 201 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 AZU1P20160 251 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 TAS2R60P59551 318 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 KRTAP10-2P60368 255 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 FCN2Q15485 313 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 SPINK13Q1W4C9 94 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 ZNF493Q6ZR52 646 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 NUDT10Q8NFP7 164 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 NUDT11Q96G61 164 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 CIB3Q96Q77 187 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-208ENST00000397204 LINC01587Q99440 93 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 NAA50Q9GZZ1 169 aaKnown RBP6.11□□□□□ -1.43
CAPN3-208ENST00000397204 SCRT2Q9NQ03 307 aa6.11□□□□□ -1.43
CAPN3-208ENST00000397204 TIMM8BQ9Y5J9 83 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-208ENST00000397204 TRAV8-2A0A0B4J237 113 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 PLAC8L1A1L4L8 177 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 IL18Q14116 193 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 CLINT1Q14677 625 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 TMEM128Q5BJH2 165 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 TTC32Q5I0X7 151 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 IGFL4Q6B9Z1 124 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 SSX7Q7RTT5 188 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 S100A7AQ86SG5 101 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 ZNF503Q96F45 646 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 DIRAS2Q96HU8 199 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 TMEM147Q9BVK8 224 aa6.1□□□□□ -1.43
CAPN3-208ENST00000397204 PAIP2BQ9ULR5 123 aaKnown RBP6.1□□□□□ -1.43
CAPN3-208ENST00000397204 TRAV12-2A0A075B6T6 113 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 PRSS46E5RG02 174 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 SYNGR2O43760 224 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 IAPPP10997 89 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 RPL7P18124 248 aaKnown RBP6.09□□□□□ -1.43
CAPN3-208ENST00000397204 GATA2P23769 480 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-208ENST00000397204 RHOBP62745 196 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 FGL1Q08830 312 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 TMEM182Q6ZP80 229 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-208ENST00000397204 TMEM144Q7Z5S9 345 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 SPATA12Q7Z6I5 190 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 BAP18Q8IXM2 172 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 RNF182Q8N6D2 247 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 LRTM2Q8N967 370 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 ZNF738Q8NE65 137 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 OR8A1Q8NGG7 326 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 OR10J6PQ8NGY7 276 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 C16orf74Q96GX8 76 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 SLC25A39Q9BZJ4 359 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-208ENST00000397204 PPP1R14DQ9NXH3 145 aa6.09□□□□□ -1.43
CAPN3-208ENST00000397204 RSL24D1Q9UHA3 163 aaKnown RBP6.09□□□□□ -1.43
CAPN3-208ENST00000397204 A0A1W2PPQ1 181 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 ZNF561-AS1K7EIQ3 104 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 WRBO00258 174 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 ADAP1O75689 374 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 HTN1P15515 57 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 CXCL3P19876 107 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 RAP2BP61225 183 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 PSG3Q16557 428 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 LRRC20Q8TCA0 184 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 RXFP4Q8TDU9 374 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 CHAC2Q8WUX2 184 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 GNPNAT1Q96EK6 184 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-208ENST00000397204 SHANK2-AS3Q9BTD1 123 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 Q9H3A6 140 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 NOP10Q9NPE3 64 aaKnown RBP6.08□□□□□ -1.44
CAPN3-208ENST00000397204 MCUBQ9NWR8 336 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 RNF24Q9Y225 148 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 PRELID1Q9Y255 219 aa6.08□□□□□ -1.44
CAPN3-208ENST00000397204 STRAPQ9Y3F4 350 aaKnown RBP6.08□□□□□ -1.44
CAPN3-208ENST00000397204 A0A087X0K7 114 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 H3BNG1 76 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 H3BRN7 92 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 H7BYZ3 331 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 HYPMO75409 117 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 IL5P05113 134 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 M6PRP20645 277 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 CDKN1BP46527 198 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 PLP1P60201 277 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 SELENOTP62341 195 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 HIST1H1AQ02539 215 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-208ENST00000397204 AKR1C1Q04828 323 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 OR5I1Q13606 314 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 SPANXN5Q5MJ07 72 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 CCDC28AQ8IWP9 274 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 TMEM263Q8WUH6 116 aaKnown RBP6.07□□□□□ -1.44
CAPN3-208ENST00000397204 SOSTQ9BQB4 213 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 C20orf144Q9BQM9 153 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 UPK3BQ9BT76 320 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 HIGD1AQ9Y241 93 aa6.07□□□□□ -1.44
CAPN3-208ENST00000397204 TRAV26-1A0A087WT03 109 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 ZNF701M0R085 212 aaPredicted RBP6.06□□□□□ -1.44
CAPN3-208ENST00000397204 S100A6P06703 90 aa6.06□□□□□ -1.44
CAPN3-208ENST00000397204 FAUP35544 74 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms