RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 SLC45A2Q9UMX9 530 aa10.86□□□□□ -0.67
SEC13-208ENST00000397109 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 LOC102724200A0A096LPH7 203 aaPredicted RBP10.85□□□□□ -0.67
SEC13-208ENST00000397109 YPEL3P61236 119 aaPredicted RBP10.85□□□□□ -0.67
SEC13-208ENST00000397109 RHOBP62745 196 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 TIGITQ495A1 244 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 FAM90A2PQ658T7 463 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 THAP8Q8NA92 274 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 Q8WTZ3 238 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 NPIPB3Q92617 1050 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 METTL26Q96S19 204 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 RARRES2Q99969 163 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 GNG13Q9P2W3 67 aa10.85□□□□□ -0.67
SEC13-208ENST00000397109 IGKV1OR2-108A0A075B7D4 117 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 IGHV3OR16-13A0A075B7E8 117 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 IGHV3-74A0A0B4J1X5 117 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 CXorf1O96002 111 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 STAG3L2P0CL84 134 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 STAG3L3P0CL85 134 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 OR10J1P30954 320 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 FAM122CQ6P4D5 195 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 TCF24Q7RTU0 167 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 STPG3Q8N7X2 389 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 CLRN3Q8NCR9 226 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 MUC7Q8TAX7 377 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 ACY3Q96HD9 319 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 ARL2-SNX15V9GYD0 113 aa10.84□□□□□ -0.67
SEC13-208ENST00000397109 IGKV1D-37A0A075B6S9 117 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 LINC00869P0C866 280 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 CRYBB3P26998 211 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 BTN1A1Q13410 526 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 FAM74A3Q4VXF1 159 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 MIC13Q5XKP0 118 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 SSX7Q7RTT5 188 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 RXFP4Q8TDU9 374 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 GATAD1Q8WUU5 269 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 TRGV9Q99603 122 aa10.83□□□□□ -0.68
SEC13-208ENST00000397109 A0A1B0GV50 99 aa10.82□□□□□ -0.68
SEC13-208ENST00000397109 ZFP92A6NM28 416 aa10.82□□□□□ -0.68
SEC13-208ENST00000397109 SCO1O75880 301 aa10.82□□□□□ -0.68
SEC13-208ENST00000397109 APOHP02749 345 aaPredicted RBP10.82□□□□□ -0.68
SEC13-208ENST00000397109 MEF2BQ02080 365 aaPredicted RBP10.82□□□□□ -0.68
SEC13-208ENST00000397109 RHEBQ15382 184 aa10.82□□□□□ -0.68
SEC13-208ENST00000397109 ODF3L2Q3SX64 289 aa10.82□□□□□ -0.68
SEC13-208ENST00000397109 PFDN5Q99471 154 aa10.82□□□□□ -0.68
SEC13-208ENST00000397109 MRPL32Q9BYC8 188 aaKnown RBP10.82□□□□□ -0.68
SEC13-208ENST00000397109 SLC25A22Q9H936 323 aa10.82□□□□□ -0.68
SEC13-208ENST00000397109 IGKV3-7A0A075B6H7 116 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 TRAV2A0A0B4J234 112 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 DNASE2O00115 360 aaPredicted RBP10.81□□□□□ -0.68
SEC13-208ENST00000397109 APOC4P55056 127 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 FGF8P55075 233 aaPredicted RBP10.81□□□□□ -0.68
SEC13-208ENST00000397109 TAS2R45P59539 299 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 RPL11P62913 178 aaKnown RBP10.81□□□□□ -0.68
SEC13-208ENST00000397109 PNRC1Q12796 327 aaPredicted RBP10.81□□□□□ -0.68
SEC13-208ENST00000397109 ATRAIDQ6UW56 229 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 CYP2G1PQ6ZSU1 146 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 OR1L4Q8NGR5 311 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 GRAMD2BQ96HH9 432 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 EDA2RQ9HAV5 297 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 DNAH7Q8WXX0 4024 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 IGHV3-66A0A0C4DH42 116 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 B4DEV8 164 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 UBE2CO00762 179 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 TOMM40O96008 361 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 RD3LP0DJH9 198 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 TFPI2P48307 235 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 PQLC2Q6ZP29 291 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 GBGT1Q8N5D6 347 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 NIPSNAP3BQ9BS92 247 aa10.81□□□□□ -0.68
SEC13-208ENST00000397109 ELOA3CA0A087WX78 387 aaPredicted RBP10.8□□□□□ -0.68
SEC13-208ENST00000397109 KIR2DL5BA0A0G2JN68 375 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 KIR2DL5BA0A0G2JPC4 375 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 PDE6DO43924 150 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 FABP1P07148 127 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 OR5G3P0C626 314 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 KIR2DL5AQ8N109 375 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 KIR2DL5BQ8NHK3 375 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 TVP23CQ96ET8 276 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 MS4A6AQ9H2W1 248 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 RETNQ9HD89 108 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 DNAJC4Q9NNZ3 241 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 FUT9Q9Y231 359 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 PRELID1Q9Y255 219 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 U3KQE9 123 aa10.8□□□□□ -0.68
SEC13-208ENST00000397109 IL4P05112 153 aa10.79□□□□□ -0.68
SEC13-208ENST00000397109 ZNF90Q03938 601 aa10.79□□□□□ -0.68
SEC13-208ENST00000397109 WFDC3Q8IUB2 231 aa10.79□□□□□ -0.68
SEC13-208ENST00000397109 CYB561D1Q8N8Q1 229 aa10.79□□□□□ -0.68
SEC13-208ENST00000397109 SMCO4Q9NRQ5 59 aa10.79□□□□□ -0.68
SEC13-208ENST00000397109 TMEM167BQ9NRX6 74 aa10.79□□□□□ -0.68
SEC13-208ENST00000397109 A0A087WWC5 75 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 HELTA6NFD8 242 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 F6UZH7 168 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 PSG1P11464 419 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 PLP1P60201 277 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 FAM78BQ5VT40 261 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 Q6ZWC4 215 aa10.78□□□□□ -0.68
SEC13-208ENST00000397109 STXBP6Q8NFX7 210 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms