RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 OR4X2Q8NGF9 303 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 TEX22C9J3V5 150 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 IGKV1-17P01599 117 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 MAJINQ3KP22 176 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 TOMM20LQ6UXN7 152 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 Q8N9W7 124 aa12□□□□□ -0.49
MCF2L-205ENST00000397017 A0A087X0M5 115 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 A0A1B0GX30 115 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HLA-DMBP28068 263 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 VWC2Q2TAL6 325 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 C8orf31Q8N9H6 132 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 NPFFR1Q9GZQ6 430 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 IGHV3OR16-12A0A075B7B8 117 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 F5H697 171 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 K7EIM0 57 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 PRSS3P2Q8NHM4 247 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 TMEM208Q9BTX3 173 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BKO60814 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 S100A8P05109 93 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BJP06899 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BOP23527 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BBP33778 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BDP58876 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BCP62807 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 TWIST1Q15672 202 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST2H2BEQ16778 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-205ENST00000397017 TMEM116Q8NCL8 245 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BHQ93079 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BNQ99877 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 HIST1H2BMQ99879 126 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 IL36BQ9NZH7 164 aa11.99□□□□□ -0.49
MCF2L-205ENST00000397017 A0A087WWC5 75 aa11.98□□□□□ -0.49
MCF2L-205ENST00000397017 A0A1B0GUS0 222 aa11.98□□□□□ -0.49
MCF2L-205ENST00000397017 ZNF25P17030 456 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-205ENST00000397017 LY6G5BQ8NDX9 201 aa11.98□□□□□ -0.49
MCF2L-205ENST00000397017 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
MCF2L-205ENST00000397017 LOC102724200A0A096LPH7 203 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-205ENST00000397017 TCRAP04437 139 aa11.98□□□□□ -0.49
MCF2L-205ENST00000397017 PRSS22Q9GZN4 317 aa11.98□□□□□ -0.49
MCF2L-205ENST00000397017 PSG8Q9UQ74 426 aa11.98□□□□□ -0.49
MCF2L-205ENST00000397017 A0A0G2JLM5 398 aa11.98□□□□□ -0.49
MCF2L-205ENST00000397017 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 C1orf122Q6ZSJ8 110 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 NUDT10Q8NFP7 164 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 NUDT11Q96G61 164 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 TNFRSF13BO14836 293 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-205ENST00000397017 TMEM249Q2WGJ8 235 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 ZNF586Q9NXT0 402 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 A0A1W2PS18 150 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 CBY3A6NI87 242 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 WDR73Q6P4I2 378 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 OR10J6PQ8NGY7 276 aa11.97□□□□□ -0.49
MCF2L-205ENST00000397017 HOXA3O43365 443 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-205ENST00000397017 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.49
MCF2L-205ENST00000397017 ZNF491Q8N8L2 437 aa11.96□□□□□ -0.49
MCF2L-205ENST00000397017 OTORQ9NRC9 128 aa11.96□□□□□ -0.49
MCF2L-205ENST00000397017 PSG9Q00887 426 aa11.96□□□□□ -0.49
MCF2L-205ENST00000397017 ERCC8Q13216 396 aa11.96□□□□□ -0.49
MCF2L-205ENST00000397017 RBPMS2Q6ZRY4 209 aaKnown RBP11.96□□□□□ -0.49
MCF2L-205ENST00000397017 GPX1P07203 203 aa11.96□□□□□ -0.5
MCF2L-205ENST00000397017 ZNF705AQ6ZN79 300 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-205ENST00000397017 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 COTL1Q14019 142 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 FBLN7Q53RD9 439 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 FA2HQ7L5A8 372 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 DEFB104AQ8WTQ1 72 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 KLK15Q9H2R5 256 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 TUBA4BQ9H853 241 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 I3L2K1 104 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 TOMM40O96008 361 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 SMIM6P0DI80 62 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 DEFB113Q30KQ7 82 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 FAM19A2Q8N3H0 131 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 FLNAP21333 2647 aaKnown RBP11.95□□□□□ -0.5
MCF2L-205ENST00000397017 TAS2R60P59551 318 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 ARL2-SNX15V9GYD0 113 aa11.95□□□□□ -0.5
MCF2L-205ENST00000397017 PSMB11A5LHX3 300 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 FNDC10F2Z333 226 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 M0QZK8 103 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 ZNF688P0C7X2 276 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 SYNJ2BPP57105 145 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 C10orf91Q5T1B1 145 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 CFHR4Q92496 578 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 FXYD5Q96DB9 178 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 SHANK2-AS3Q9BTD1 123 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 MGPP08493 103 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 FAM110DQ8TAY7 271 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-205ENST00000397017 KLF2Q9Y5W3 355 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-205ENST00000397017 ITPR3Q14573 2671 aa11.94□□□□□ -0.5
MCF2L-205ENST00000397017 TET2Q6N021 2002 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-205ENST00000397017 ADMP35318 185 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 RIGQ13278 110 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 M0R2Z0 102 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 DEFB136Q30KP8 78 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 WFDC11Q8NEX6 87 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 VN1R17PQ8TDU5 208 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 CDC42EP3Q9UKI2 254 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 M0R381 172 aa11.93□□□□□ -0.5
MCF2L-205ENST00000397017 PAFAH1B2P68402 229 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms