RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 MYOD1P15172 320 aa15.02□□□□□ -0.01
HOXC6-202ENST00000394331 Q86TA4 180 aa15.02□□□□□ -0.01
HOXC6-202ENST00000394331 TM4SF20Q53R12 229 aa15.01□□□□□ -0.01
HOXC6-202ENST00000394331 PSG8Q9UQ74 426 aa15.01□□□□□ -0.01
HOXC6-202ENST00000394331 H3BMG7 143 aa15.01□□□□□ -0.01
HOXC6-202ENST00000394331 SPINK8P0C7L1 97 aa15.01□□□□□ -0.01
HOXC6-202ENST00000394331 SAA2P0DJI9 122 aaPredicted RBP15.01□□□□□ -0.01
HOXC6-202ENST00000394331 TNFAIP6P98066 277 aaPredicted RBP15.01□□□□□ -0.01
HOXC6-202ENST00000394331 C1orf229Q6ZS94 237 aaPredicted RBP15.01□□□□□ -0.01
HOXC6-202ENST00000394331 LEAP2Q969E1 77 aa15.01□□□□□ -0.01
HOXC6-202ENST00000394331 NHP2Q9NX24 153 aaKnown RBP15.01□□□□□ -0.01
HOXC6-202ENST00000394331 FAM106CPP0CH98 169 aa15□□□□□ -0.01
HOXC6-202ENST00000394331 LOXL1Q08397 574 aaPredicted RBP15□□□□□ -0.01
HOXC6-202ENST00000394331 MLANAQ16655 118 aa15□□□□□ -0.01
HOXC6-202ENST00000394331 TMEM30BQ3MIR4 351 aa15□□□□□ -0.01
HOXC6-202ENST00000394331 FAM106AQ4KMX7 169 aa15□□□□□ -0.01
HOXC6-202ENST00000394331 FAM201AQ5SY85 155 aa15□□□□□ -0.01
HOXC6-202ENST00000394331 RND1Q92730 232 aa15□□□□□ -0.01
HOXC6-202ENST00000394331 FOXI1Q12951 378 aa15□□□□□ -0.01
HOXC6-202ENST00000394331 C1QTNF4Q9BXJ3 329 aa15□□□□□ -0.01
HOXC6-202ENST00000394331 ARMS2P0C7Q2 107 aa14.99□□□□□ -0.01
HOXC6-202ENST00000394331 LINC00305Q7Z4B0 112 aa14.99□□□□□ -0.01
HOXC6-202ENST00000394331 SGK494Q96LW2 274 aa14.99□□□□□ -0.01
HOXC6-202ENST00000394331 FRYQ5TBA9 3013 aa14.99□□□□□ -0.01
HOXC6-202ENST00000394331 HOXB4P17483 251 aaPredicted RBP14.99□□□□□ -0.01
HOXC6-202ENST00000394331 LINC01559Q495D7 138 aa14.99□□□□□ -0.01
HOXC6-202ENST00000394331 TRBV25-1A0A075B6N4 114 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 APOMO95445 188 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 IGHV1-46P01743 117 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 CRYGCP07315 174 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 UTF1Q5T230 341 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 C20orf78Q9BR46 151 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 CACNA1HO95180 2353 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 IGKV1D-37A0A075B6S9 117 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 TM4SF5O14894 197 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 THBDP07204 575 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 INSL3P51460 131 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 VCX2Q9H322 139 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 LINC00574Q9H8X3 128 aa14.98□□□□□ -0.01
HOXC6-202ENST00000394331 NDUFS7O75251 213 aa14.97□□□□□ -0.01
HOXC6-202ENST00000394331 EVI2AP22794 236 aa14.97□□□□□ -0.01
HOXC6-202ENST00000394331 GAFA1Q96PS6 74 aa14.97□□□□□ -0.01
HOXC6-202ENST00000394331 WI2-2373I1.2A0A1W2PRP0 233 aa14.97□□□□□ -0.01
HOXC6-202ENST00000394331 DEFB108BQ8NET1 73 aa14.97□□□□□ -0.01
HOXC6-202ENST00000394331 HHLA3Q9XRX5 114 aa14.97□□□□□ -0.01
HOXC6-202ENST00000394331 NPIPB5A8MRT5 1133 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 SSBP2P81877 361 aaPredicted RBP14.96□□□□□ -0.01
HOXC6-202ENST00000394331 GAGE5Q13069 117 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 GAGE6Q13070 117 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 RRN3P1Q2M238 152 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 Q6ZUT4 128 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 SYT8Q8NBV8 401 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 RNF183Q96D59 192 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 A0A1B0GWB2 263 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 C12orf74Q32Q52 190 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 ORMDL3Q8N138 153 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 PRELID3AQ96N28 172 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 CCL13Q99616 98 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 DYSFO75923 2080 aa14.96□□□□□ -0.01
HOXC6-202ENST00000394331 LINC01546A6NGU7 62 aa14.96□□□□□ -0.02
HOXC6-202ENST00000394331 CD40P25942 277 aa14.96□□□□□ -0.02
HOXC6-202ENST00000394331 ERHP84090 104 aaKnown RBP14.96□□□□□ -0.02
HOXC6-202ENST00000394331 DUX4L9Q6RFH8 374 aaPredicted RBP14.96□□□□□ -0.02
HOXC6-202ENST00000394331 Q9H3A6 140 aa14.96□□□□□ -0.02
HOXC6-202ENST00000394331 NDUFA4L2Q9NRX3 87 aa14.96□□□□□ -0.02
HOXC6-202ENST00000394331 DKK2Q9UBU2 259 aa14.96□□□□□ -0.02
HOXC6-202ENST00000394331 OTOGLQ3ZCN5 2332 aa14.95□□□□□ -0.02
HOXC6-202ENST00000394331 IGKV2D-26A0A0A0MRZ7 120 aa14.95□□□□□ -0.02
HOXC6-202ENST00000394331 TNFRSF13BO14836 293 aaPredicted RBP14.95□□□□□ -0.02
HOXC6-202ENST00000394331 GP9P14770 177 aa14.95□□□□□ -0.02
HOXC6-202ENST00000394331 ZCCHC24Q8N2G6 241 aaKnown RBP14.95□□□□□ -0.02
HOXC6-202ENST00000394331 D6R8Y8 96 aa14.95□□□□□ -0.02
HOXC6-202ENST00000394331 TCTAP57738 103 aa14.95□□□□□ -0.02
HOXC6-202ENST00000394331 FAM27E3Q08E93 113 aa14.95□□□□□ -0.02
HOXC6-202ENST00000394331 RBMXL3Q8N7X1 1067 aaKnown RBP14.95□□□□□ -0.02
HOXC6-202ENST00000394331 FAM110AQ9BQ89 295 aa14.95□□□□□ -0.02
HOXC6-202ENST00000394331 OTORQ9NRC9 128 aa14.95□□□□□ -0.02
HOXC6-202ENST00000394331 RPUSD1Q9UJJ7 312 aaKnown RBP14.95□□□□□ -0.02
HOXC6-202ENST00000394331 IGLV2-11P01706 119 aa14.94□□□□□ -0.02
HOXC6-202ENST00000394331 LINC01619G3V211 115 aa14.94□□□□□ -0.02
HOXC6-202ENST00000394331 TEX36Q5VZQ5 186 aa14.94□□□□□ -0.02
HOXC6-202ENST00000394331 ZNF562Q6V9R5 426 aa14.94□□□□□ -0.02
HOXC6-202ENST00000394331 FAM216BQ8N7L0 139 aa14.94□□□□□ -0.02
HOXC6-202ENST00000394331 NUP37Q8NFH4 326 aa14.94□□□□□ -0.02
HOXC6-202ENST00000394331 FAM57AQ8TBR7 257 aa14.94□□□□□ -0.02
HOXC6-202ENST00000394331 SVILO95425 2214 aa14.93□□□□□ -0.02
HOXC6-202ENST00000394331 C16orf97H3BN30 126 aa14.93□□□□□ -0.02
HOXC6-202ENST00000394331 FAM104BQ5XKR9 115 aa14.93□□□□□ -0.02
HOXC6-202ENST00000394331 CIARTQ8N365 385 aaPredicted RBP14.93□□□□□ -0.02
HOXC6-202ENST00000394331 SRSF12Q8WXF0 261 aaKnown RBP14.93□□□□□ -0.02
HOXC6-202ENST00000394331 CADP27708 2225 aa14.93□□□□□ -0.02
HOXC6-202ENST00000394331 MT-ATP8P03928 68 aa14.93□□□□□ -0.02
HOXC6-202ENST00000394331 ODF1Q14990 250 aa14.93□□□□□ -0.02
HOXC6-202ENST00000394331 KLF17Q5JT82 389 aaPredicted RBP14.93□□□□□ -0.02
HOXC6-202ENST00000394331 SS18L2Q9UHA2 77 aa14.93□□□□□ -0.02
HOXC6-202ENST00000394331 NPIPB3Q92617 1050 aa14.92□□□□□ -0.02
HOXC6-202ENST00000394331 ZNF785A8K8V0 405 aa14.92□□□□□ -0.02
HOXC6-202ENST00000394331 TNFRSF1AP19438 455 aa14.92□□□□□ -0.02
HOXC6-202ENST00000394331 GATA3P23771 443 aa14.92□□□□□ -0.02
HOXC6-202ENST00000394331 CFAP126Q5VTH2 177 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms