RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 RNF24Q9Y225 148 aa13.91□□□□□ -0.18
SNCB-202ENST00000393693 HIGD1AQ9Y241 93 aa13.91□□□□□ -0.18
SNCB-202ENST00000393693 KRBOX1C9JBD0 128 aa13.9□□□□□ -0.18
SNCB-202ENST00000393693 F8W735 103 aaPredicted RBP13.9□□□□□ -0.18
SNCB-202ENST00000393693 GGCTO75223 188 aaKnown RBP13.9□□□□□ -0.18
SNCB-202ENST00000393693 CLEC3BP05452 202 aa13.9□□□□□ -0.18
SNCB-202ENST00000393693 CTSGP08311 255 aa13.9□□□□□ -0.18
SNCB-202ENST00000393693 RELQ04864 619 aaPredicted RBP13.9□□□□□ -0.18
SNCB-202ENST00000393693 CLEC19AQ6UXS0 136 aa13.9□□□□□ -0.18
SNCB-202ENST00000393693 STXBP6Q8NFX7 210 aa13.9□□□□□ -0.18
SNCB-202ENST00000393693 TMEM37Q8WXS4 190 aa13.9□□□□□ -0.18
SNCB-202ENST00000393693 NARS2Q96I59 477 aaKnown RBP13.9□□□□□ -0.18
SNCB-202ENST00000393693 LGALS9O00182 355 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 TGOLN2O43493 480 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 CBLN1P23435 193 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 PATE2Q6UY27 113 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 MIR17HGQ75NE6 70 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 LINC00305Q7Z4B0 112 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 TMEM61Q8N0U2 210 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 RNF125Q96EQ8 232 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 TMEM167BQ9NRX6 74 aa13.89□□□□□ -0.19
SNCB-202ENST00000393693 IL4P05112 153 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 CD5P06127 495 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 ARL14EPLP0DKL9 152 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 GCHFRP30047 84 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 ZNF506Q5JVG8 444 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 SPATA31B1PQ5VZV4 182 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 LINC00476Q8WZB0 136 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 CCDC140Q96MF4 163 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 OVOL2Q9BRP0 275 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 MLXQ9UH92 298 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 VAX2Q9UIW0 290 aa13.88□□□□□ -0.19
SNCB-202ENST00000393693 LOC102723971A0A1B0GUV8 181 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 ZNF320A2RRD8 509 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 TMEM213A2RRL7 107 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 OR7C2O60412 319 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 EIF3GO75821 320 aaKnown RBP eCLIP13.87□□□□□ -0.19
SNCB-202ENST00000393693 BCL2P10415 239 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 ARL3P36405 182 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 GPHB5Q86YW7 130 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 CHRDL1Q9BU40 450 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 TMEM231Q9H6L2 316 aa13.87□□□□□ -0.19
SNCB-202ENST00000393693 MRPL27Q9P0M9 148 aaKnown RBP13.87□□□□□ -0.19
SNCB-202ENST00000393693 LY6G6CO95867 125 aa13.86□□□□□ -0.19
SNCB-202ENST00000393693 ADMP35318 185 aa13.86□□□□□ -0.19
SNCB-202ENST00000393693 TXNDC17Q9BRA2 123 aa13.86□□□□□ -0.19
SNCB-202ENST00000393693 TMPRSS5Q9H3S3 457 aa13.86□□□□□ -0.19
SNCB-202ENST00000393693 PUS1Q9Y606 427 aaKnown RBP eCLIP13.86□□□□□ -0.19
SNCB-202ENST00000393693 TMEM218A2RU14 115 aa13.85□□□□□ -0.19
SNCB-202ENST00000393693 NDUFS6O75380 124 aaKnown RBP13.85□□□□□ -0.19
SNCB-202ENST00000393693 SRSF3P84103 164 aaKnown RBP13.85□□□□□ -0.19
SNCB-202ENST00000393693 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
SNCB-202ENST00000393693 UHRF2Q96PU4 802 aa13.85□□□□□ -0.19
SNCB-202ENST00000393693 SCRT1Q9BWW7 348 aa13.85□□□□□ -0.19
SNCB-202ENST00000393693 SLC25A39Q9BZJ4 359 aaPredicted RBP13.85□□□□□ -0.19
SNCB-202ENST00000393693 RABAC1Q9UI14 185 aa13.85□□□□□ -0.19
SNCB-202ENST00000393693 ARL2-SNX15V9GYD0 113 aa13.85□□□□□ -0.19
SNCB-202ENST00000393693 LOC102724200A0A096LPH7 203 aaPredicted RBP13.84□□□□□ -0.19
SNCB-202ENST00000393693 ICAM4Q14773 271 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 TM4SF20Q53R12 229 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 SUN5Q8TC36 379 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 RARRES2Q99969 163 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 PAXXQ9BUH6 204 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 SLC25A2Q9BXI2 301 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 KRTAP17-1Q9BYP8 105 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 SLC35B3Q9H1N7 401 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 OR51M1Q9H341 326 aa13.84□□□□□ -0.19
SNCB-202ENST00000393693 CXorf65A6NEN9 183 aa13.83□□□□□ -0.2
SNCB-202ENST00000393693 FAM106AQ4KMX7 169 aa13.83□□□□□ -0.2
SNCB-202ENST00000393693 UNQ9165/PRO28630Q6UXU0 137 aa13.83□□□□□ -0.2
SNCB-202ENST00000393693 FAM167A-AS1Q96KT0 104 aa13.83□□□□□ -0.2
SNCB-202ENST00000393693 SHANK2-AS3Q9BTD1 123 aa13.83□□□□□ -0.2
SNCB-202ENST00000393693 FRAS1Q86XX4 4008 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 TRAV5A0A0B4J249 113 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 A0A0J9YWU9 116 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 A8MWP6 167 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 F8W036 122 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 H3BRN7 92 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 PAGE4O60829 102 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 SFTA3P0C7M3 94 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 UBE2L3P68036 154 aaKnown RBP13.82□□□□□ -0.2
SNCB-202ENST00000393693 MEF2BQ02080 365 aaPredicted RBP13.82□□□□□ -0.2
SNCB-202ENST00000393693 TOMM20LQ6UXN7 152 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 TMEM14CQ9P0S9 112 aa13.82□□□□□ -0.2
SNCB-202ENST00000393693 NDUFA4O00483 81 aa13.81□□□□□ -0.2
SNCB-202ENST00000393693 SRP19P09132 144 aaKnown RBP13.81□□□□□ -0.2
SNCB-202ENST00000393693 USF2Q15853 346 aaPredicted RBP13.81□□□□□ -0.2
SNCB-202ENST00000393693 MORN5Q5VZ52 161 aa13.81□□□□□ -0.2
SNCB-202ENST00000393693 CST9LP1Q5W188 147 aa13.81□□□□□ -0.2
SNCB-202ENST00000393693 BPIFA4PQ86YQ2 179 aa13.81□□□□□ -0.2
SNCB-202ENST00000393693 LINC00052Q96N35 136 aa13.81□□□□□ -0.2
SNCB-202ENST00000393693 SEC11CQ9BY50 192 aa13.81□□□□□ -0.2
SNCB-202ENST00000393693 NKX6-2Q9C056 277 aaPredicted RBP13.81□□□□□ -0.2
SNCB-202ENST00000393693 IGHV3-35A0A0C4DH35 117 aa13.8□□□□□ -0.2
SNCB-202ENST00000393693 C11orf94C9JXX5 98 aa13.8□□□□□ -0.2
SNCB-202ENST00000393693 UBE2G2P60604 165 aa13.8□□□□□ -0.2
SNCB-202ENST00000393693 ZNF503Q96F45 646 aa13.8□□□□□ -0.2
SNCB-202ENST00000393693 METTL26Q96S19 204 aa13.8□□□□□ -0.2
SNCB-202ENST00000393693 ZFAND3Q9H8U3 227 aa13.8□□□□□ -0.2
SNCB-202ENST00000393693 A0A1W2PRE2 83 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms