RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 GOLT1AQ6ZVE7 132 aa17.11■□□□□ 0.33
HMGA2-203ENST00000393578 FAM231DQ6ZW35 169 aa17.11■□□□□ 0.33
HMGA2-203ENST00000393578 SMAD5-AS1Q9Y6J3 95 aa17.11■□□□□ 0.33
HMGA2-203ENST00000393578 HOXA3O43365 443 aaPredicted RBP17.11■□□□□ 0.33
HMGA2-203ENST00000393578 ZNF253O75346 499 aa17.11■□□□□ 0.33
HMGA2-203ENST00000393578 FOXC2Q99958 501 aa17.11■□□□□ 0.33
HMGA2-203ENST00000393578 PDZD2O15018 2839 aa17.1■□□□□ 0.33
HMGA2-203ENST00000393578 TRBV6-1A0A0K0K1D8 114 aa17.1■□□□□ 0.33
HMGA2-203ENST00000393578 IGHG4P01861 327 aa17.1■□□□□ 0.33
HMGA2-203ENST00000393578 TMEM95Q3KNT9 176 aa17.1■□□□□ 0.33
HMGA2-203ENST00000393578 MXRA5Q9NR99 2828 aa17.1■□□□□ 0.33
HMGA2-203ENST00000393578 C5orf52A6NGY3 159 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 K7EQM0 130 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 PHOX2AO14813 284 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 IGLV2-11P01706 119 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 SNRPEP62304 92 aaKnown RBP17.09■□□□□ 0.33
HMGA2-203ENST00000393578 PRSS22Q9GZN4 317 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 ZNF320A2RRD8 509 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 SMAD7O15105 426 aaKnown RBP17.09■□□□□ 0.33
HMGA2-203ENST00000393578 Q86TA4 180 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 ARL6IP6Q8N6S5 226 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 TMEM75Q8N9X5 138 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 OR4X2Q8NGF9 303 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 U3KQE9 123 aa17.09■□□□□ 0.33
HMGA2-203ENST00000393578 TMEM89A2RUT3 159 aa17.08■□□□□ 0.33
HMGA2-203ENST00000393578 DIRC3C9JPN6 131 aa17.08■□□□□ 0.33
HMGA2-203ENST00000393578 NDUFA4O00483 81 aa17.08■□□□□ 0.33
HMGA2-203ENST00000393578 TRBV12-3P01733 135 aa17.08■□□□□ 0.33
HMGA2-203ENST00000393578 PSMB8P28062 276 aa17.08■□□□□ 0.33
HMGA2-203ENST00000393578 NPFFR1Q9GZQ6 430 aa17.08■□□□□ 0.33
HMGA2-203ENST00000393578 A0A087X0K7 114 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 TRAV8-1A0A0A6YYK1 113 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BKO60814 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 IGHV3-11P01762 117 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BJP06899 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BOP23527 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BBP33778 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BDP58876 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BCP62807 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST2H2BEQ16778 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.08■□□□□ 0.32
HMGA2-203ENST00000393578 FRZBQ92765 325 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BHQ93079 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BNQ99877 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 HIST1H2BMQ99879 126 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 SERTAD4Q9NUC0 356 aa17.08■□□□□ 0.32
HMGA2-203ENST00000393578 ZNF705GA8MUZ8 300 aaPredicted RBP17.07■□□□□ 0.32
HMGA2-203ENST00000393578 M0R3E3 92 aa17.07■□□□□ 0.32
HMGA2-203ENST00000393578 CSN1S1P47710 185 aa17.07■□□□□ 0.32
HMGA2-203ENST00000393578 LCNL1Q6ZST4 164 aa17.07■□□□□ 0.32
HMGA2-203ENST00000393578 TMEM183AQ8IXX5 376 aa17.07■□□□□ 0.32
HMGA2-203ENST00000393578 CCDC168Q8NDH2 2452 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 SERTM2A0A1B0GWG4 89 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 FAM209BQ5JX69 171 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 PRR27Q6MZM9 219 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 NUDT10Q8NFP7 164 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 NUDT11Q96G61 164 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 UNC79Q9P2D8 2635 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 ZNF785A8K8V0 405 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 APOHP02749 345 aaPredicted RBP17.06■□□□□ 0.32
HMGA2-203ENST00000393578 PSG3Q16557 428 aa17.06■□□□□ 0.32
HMGA2-203ENST00000393578 ZNF469Q96JG9 3925 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-203ENST00000393578 ZNF207O43670 478 aaKnown RBP17.05■□□□□ 0.32
HMGA2-203ENST00000393578 GATCO43716 136 aaKnown RBP17.05■□□□□ 0.32
HMGA2-203ENST00000393578 TRGC1P0CF51 173 aa17.05■□□□□ 0.32
HMGA2-203ENST00000393578 PRNTQ86SH4 94 aa17.05■□□□□ 0.32
HMGA2-203ENST00000393578 ZNF702PQ9H963 129 aa17.05■□□□□ 0.32
HMGA2-203ENST00000393578 ZNF331Q9NQX6 463 aaPredicted RBP17.05■□□□□ 0.32
HMGA2-203ENST00000393578 ZFP30Q9Y2G7 519 aa17.05■□□□□ 0.32
HMGA2-203ENST00000393578 IGHV3-66A0A0C4DH42 116 aa17.04■□□□□ 0.32
HMGA2-203ENST00000393578 SMIM27A0A1W2PRY6 76 aa17.04■□□□□ 0.32
HMGA2-203ENST00000393578 UBE2CO00762 179 aa17.04■□□□□ 0.32
HMGA2-203ENST00000393578 ACTL10Q5JWF8 245 aa17.04■□□□□ 0.32
HMGA2-203ENST00000393578 ZNF492Q9P255 531 aa17.04■□□□□ 0.32
HMGA2-203ENST00000393578 GCN1Q92616 2671 aaKnown RBP17.04■□□□□ 0.32
HMGA2-203ENST00000393578 SIGLECL1Q8N7X8 197 aa17.04■□□□□ 0.32
HMGA2-203ENST00000393578 PSG8Q9UQ74 426 aa17.04■□□□□ 0.32
HMGA2-203ENST00000393578 ITPR2Q14571 2701 aa17.03■□□□□ 0.32
HMGA2-203ENST00000393578 MEOX2P50222 304 aa17.03■□□□□ 0.32
HMGA2-203ENST00000393578 UNQ9165/PRO28630Q6UXU0 137 aa17.03■□□□□ 0.32
HMGA2-203ENST00000393578 IGHV3OR16-13A0A075B7E8 117 aa17.02■□□□□ 0.32
HMGA2-203ENST00000393578 IGHV3-74A0A0B4J1X5 117 aa17.02■□□□□ 0.32
HMGA2-203ENST00000393578 RPL19P84098 196 aaKnown RBP17.02■□□□□ 0.32
HMGA2-203ENST00000393578 FABP9Q0Z7S8 132 aa17.02■□□□□ 0.32
HMGA2-203ENST00000393578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.02■□□□□ 0.32
HMGA2-203ENST00000393578 GRAMD2BQ96HH9 432 aa17.02■□□□□ 0.32
HMGA2-203ENST00000393578 PEF1Q9UBV8 284 aaKnown RBP17.02■□□□□ 0.32
HMGA2-203ENST00000393578 IGHV3-49A0A0A0MS15 119 aa17.02■□□□□ 0.31
HMGA2-203ENST00000393578 SLC35B1P78383 322 aa17.02■□□□□ 0.31
HMGA2-203ENST00000393578 IL17RELQ6ZVW7 336 aa17.02■□□□□ 0.31
HMGA2-203ENST00000393578 SLC50A1Q9BRV3 221 aa17.02■□□□□ 0.31
HMGA2-203ENST00000393578 FLNAP21333 2647 aaKnown RBP17.02■□□□□ 0.31
HMGA2-203ENST00000393578 C19orf71A6NCJ1 209 aa17.01■□□□□ 0.31
HMGA2-203ENST00000393578 C16orf54Q6UWD8 224 aa17.01■□□□□ 0.31
HMGA2-203ENST00000393578 LINC00322Q6ZN03 302 aaPredicted RBP17.01■□□□□ 0.31
HMGA2-203ENST00000393578 TMEM86BQ8N661 226 aa17.01■□□□□ 0.31
HMGA2-203ENST00000393578 FBLL1A6NHQ2 334 aaKnown RBP17■□□□□ 0.31
HMGA2-203ENST00000393578 CA1P00915 261 aaPredicted RBP17■□□□□ 0.31
HMGA2-203ENST00000393578 NDUFA6P56556 154 aa17■□□□□ 0.31
HMGA2-203ENST00000393578 TRAPPC1Q9Y5R8 145 aa17■□□□□ 0.31
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