RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.55
SFXN3-202ENST00000393459 PIP4P2Q8N4L2 257 aa11.58□□□□□ -0.55
SFXN3-202ENST00000393459 CHCHD1Q96BP2 118 aaKnown RBP11.58□□□□□ -0.55
SFXN3-202ENST00000393459 JKAMPQ9P055 326 aa11.58□□□□□ -0.55
SFXN3-202ENST00000393459 PPIAL4EA0A075B759 164 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 FAM90A9PA6NNJ1 464 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 J3KRW8 73 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 PPIAL4FP0DN26 164 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 LYZL1Q6UWQ5 148 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 SIGLEC8Q9NYZ4 499 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 RNF7Q9UBF6 113 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 SORL1Q92673 2214 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 A6NDN8 102 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 C9orf118A6NHY6 69 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 ETDBQ3ZM63 59 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 FAM169BQ8N8A8 192 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 GAFA1Q96PS6 74 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 TSSC4Q9Y5U2 329 aaPredicted RBP11.58□□□□□ -0.56
SFXN3-202ENST00000393459 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
SFXN3-202ENST00000393459 LYNX1G3V0Z9 82 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 LYNX1P0DP58 116 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 WFDC2Q14508 124 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 TWIST1Q15672 202 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 Q86TA4 180 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 ZNF414Q96IQ9 312 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 PRELID3AQ96N28 172 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 TMEM133Q9H2Q1 129 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 FBXL15Q9H469 300 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 PROCRQ9UNN8 238 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 NPIPB5A8MRT5 1133 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 ATP5G2Q06055 141 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 MDS2Q8NDY4 140 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 ARPC1AQ92747 370 aa11.57□□□□□ -0.56
SFXN3-202ENST00000393459 IGKV2-40A0A087WW87 121 aaPredicted RBP11.56□□□□□ -0.56
SFXN3-202ENST00000393459 H3BMG7 143 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 IGKV2D-40P01614 121 aaPredicted RBP11.56□□□□□ -0.56
SFXN3-202ENST00000393459 CKS2P33552 79 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 SAMD5Q5TGI4 173 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 LINC01545Q5VT33 79 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 ZADH2Q8N4Q0 377 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 G3V4G9 280 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 CRXO43186 299 aaPredicted RBP11.56□□□□□ -0.56
SFXN3-202ENST00000393459 FABP2P12104 132 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 INSL3P51460 131 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.56□□□□□ -0.564e-7■■■□□ 19
SFXN3-202ENST00000393459 TMEM160Q9NX00 188 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 IGHV3-66A0A0C4DH42 116 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 CNIH1O95406 144 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 HLA-DMBP28068 263 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 ATP5L2Q7Z4Y8 100 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 MLST8Q9BVC4 326 aa11.56□□□□□ -0.56
SFXN3-202ENST00000393459 RAI1Q7Z5J4 1906 aaPredicted RBP11.55□□□□□ -0.56
SFXN3-202ENST00000393459 A0A096LNJ9 63 aa11.55□□□□□ -0.56
SFXN3-202ENST00000393459 K7EP34 96 aa11.55□□□□□ -0.56
SFXN3-202ENST00000393459 SUB1P53999 127 aaKnown RBP eCLIP11.55□□□□□ -0.56
SFXN3-202ENST00000393459 SLC25A48Q6ZT89 311 aaKnown RBP11.55□□□□□ -0.56
SFXN3-202ENST00000393459 DEFB124Q8NES8 71 aa11.55□□□□□ -0.56
SFXN3-202ENST00000393459 IGHV1-46P01743 117 aa11.55□□□□□ -0.56
SFXN3-202ENST00000393459 FTH1P19P0C7X4 201 aa11.55□□□□□ -0.56
SFXN3-202ENST00000393459 TMEM178AQ8NBL3 297 aa11.55□□□□□ -0.56
SFXN3-202ENST00000393459 ZNF714Q96N38 554 aa11.55□□□□□ -0.56
SFXN3-202ENST00000393459 HIGD1AQ9Y241 93 aa11.55□□□□□ -0.56
SFXN3-202ENST00000393459 NPYP01303 97 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 CRIP1P50238 77 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 RASL11AQ6T310 242 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 ADAMTSL5Q6ZMM2 481 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 NPFFR1Q9GZQ6 430 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 ANKHD1Q8IWZ3 2542 aaKnown RBP11.54□□□□□ -0.56
SFXN3-202ENST00000393459 IGHV3-49A0A0A0MS15 119 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 A0A1W2PPM0 123 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 C19orf71A6NCJ1 209 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 CGB3P0DN86 165 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 CGB7P0DN87 165 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 OR4C13Q8NGP0 309 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 SMAD7O15105 426 aaKnown RBP11.54□□□□□ -0.56
SFXN3-202ENST00000393459 IL4P05112 153 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 TMEM200BQ69YZ2 307 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 C19orf24Q9BVV8 132 aa11.54□□□□□ -0.56
SFXN3-202ENST00000393459 FSTL3O95633 263 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 FGF6P10767 208 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 CACNG8Q8WXS5 425 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 SLC25A39Q9BZJ4 359 aaPredicted RBP11.53□□□□□ -0.56
SFXN3-202ENST00000393459 PRSS22Q9GZN4 317 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 ZNF785A8K8V0 405 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 ORM1P02763 201 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 CT45A10P0DMU9 189 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 GP9P14770 177 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 RIGQ13278 110 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 OR5AN1Q8NGI8 311 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 IFI27L1Q96BM0 104 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 FMC1Q96HJ9 113 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 RASL11BQ9BPW5 248 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 NDFIP1Q9BT67 221 aa11.53□□□□□ -0.56
SFXN3-202ENST00000393459 LGALS7P47929 136 aa11.52□□□□□ -0.56
SFXN3-202ENST00000393459 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.56
SFXN3-202ENST00000393459 PSG8Q9UQ74 426 aa11.52□□□□□ -0.56
SFXN3-202ENST00000393459 TRAV26-2A0A0B4J265 109 aa11.52□□□□□ -0.57
SFXN3-202ENST00000393459 RPL27AP46776 148 aaKnown RBP11.52□□□□□ -0.57
SFXN3-202ENST00000393459 UFSP1Q6NVU6 142 aa11.52□□□□□ -0.57
SFXN3-202ENST00000393459 FOXC2Q99958 501 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms