RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 NDUFB4O95168 129 aa9.88□□□□□ -0.83
USP44-202ENST00000393091 SSX7Q7RTT5 188 aa9.88□□□□□ -0.83
USP44-202ENST00000393091 PPT1P50897 306 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 TMEM167BQ9NRX6 74 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 TRAV5A0A0B4J249 113 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 H3BQ15 152 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 ATF4P18848 351 aaPredicted RBP9.87□□□□□ -0.83
USP44-202ENST00000393091 ID1P41134 155 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 PAXXQ9BUH6 204 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 A0A1W2PPV4 95 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 NKX2-5P52952 324 aaPredicted RBP9.87□□□□□ -0.83
USP44-202ENST00000393091 ODF3L2Q3SX64 289 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 TEX261Q6UWH6 196 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 RNF141Q8WVD5 230 aa9.87□□□□□ -0.83
USP44-202ENST00000393091 MAP6D1Q9H9H5 199 aa9.86□□□□□ -0.83
USP44-202ENST00000393091 RBAKDNA6NC62 111 aa9.86□□□□□ -0.83
USP44-202ENST00000393091 TMED6Q8WW62 240 aa9.86□□□□□ -0.83
USP44-202ENST00000393091 NKX6-2Q9C056 277 aaPredicted RBP9.86□□□□□ -0.83
USP44-202ENST00000393091 GCHFRP30047 84 aa9.85□□□□□ -0.83
USP44-202ENST00000393091 LEMD1Q68G75 181 aa9.85□□□□□ -0.83
USP44-202ENST00000393091 FAM122CQ6P4D5 195 aa9.85□□□□□ -0.83
USP44-202ENST00000393091 ODF3Q96PU9 254 aa9.85□□□□□ -0.83
USP44-202ENST00000393091 A0A1W2PRE2 83 aa9.85□□□□□ -0.83
USP44-202ENST00000393091 TRBV7-9A0A0J9YWB2 115 aa9.85□□□□□ -0.83
USP44-202ENST00000393091 SLC25A5P05141 298 aaKnown RBP9.85□□□□□ -0.83
USP44-202ENST00000393091 NBEAP1P0C6P0 100 aa9.85□□□□□ -0.83
USP44-202ENST00000393091 SAV1Q9H4B6 383 aaPredicted RBP9.85□□□□□ -0.83
USP44-202ENST00000393091 OTORQ9NRC9 128 aa9.85□□□□□ -0.83
USP44-202ENST00000393091 AURKAIP1Q9NWT8 199 aaPredicted RBP9.85□□□□□ -0.83
USP44-202ENST00000393091 IGHV3-66A0A0C4DH42 116 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 SNRPD3P62318 126 aaKnown RBP9.84□□□□□ -0.83
USP44-202ENST00000393091 FOXI2Q6ZQN5 318 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 GTSCR1Q86UQ5 136 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 TXNDC17Q9BRA2 123 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 IGHV3-49A0A0A0MS15 119 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 SERTM2A0A1B0GWG4 89 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 HBE1P02100 147 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 ARL14EPLP0DKL9 152 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 TAGLN2P37802 199 aaKnown RBP9.84□□□□□ -0.83
USP44-202ENST00000393091 BLOC1S1P78537 153 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 PSG3Q16557 428 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 CCDC28AQ8IWP9 274 aa9.84□□□□□ -0.83
USP44-202ENST00000393091 TRBV6-1A0A0K0K1D8 114 aa9.83□□□□□ -0.84
USP44-202ENST00000393091 FAM24BQ8N5W8 94 aa9.83□□□□□ -0.84
USP44-202ENST00000393091 SLC25A22Q9H936 323 aa9.83□□□□□ -0.84
USP44-202ENST00000393091 FAM19A4Q96LR4 140 aa9.83□□□□□ -0.84
USP44-202ENST00000393091 MAP1LC3B2A6NCE7 125 aa9.83□□□□□ -0.84
USP44-202ENST00000393091 FBLL1A6NHQ2 334 aaKnown RBP9.83□□□□□ -0.84
USP44-202ENST00000393091 PYYP10082 97 aa9.83□□□□□ -0.84
USP44-202ENST00000393091 C20orf173Q96LM9 149 aa9.83□□□□□ -0.84
USP44-202ENST00000393091 MAP1LC3BQ9GZQ8 125 aa9.83□□□□□ -0.84
USP44-202ENST00000393091 SLC17A3O00476 420 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 ZNF680Q8NEM1 530 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 IGHV3OR16-13A0A075B7E8 117 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 IGHV3-74A0A0B4J1X5 117 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 KIR2DL5BA0A0G2JN68 375 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 KIR2DL5BA0A0G2JPC4 375 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 DNASE2O00115 360 aaPredicted RBP9.82□□□□□ -0.84
USP44-202ENST00000393091 IFNA7P01567 189 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 HLA-DRB4P13762 266 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 KIR2DL5AQ8N109 375 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 KIR2DL5BQ8NHK3 375 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 MANBALQ9NQG1 85 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 BOLA1Q9Y3E2 137 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 HLA-DRB4X5D2U9 266 aa9.82□□□□□ -0.84
USP44-202ENST00000393091 OR11H12B2RN74 326 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 NPIPB6E9PJ23 425 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 H2AFB1P0C5Y9 115 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 UBE2L3P68036 154 aaKnown RBP9.81□□□□□ -0.84
USP44-202ENST00000393091 TRPT1Q86TN4 253 aaKnown RBP9.81□□□□□ -0.84
USP44-202ENST00000393091 RXFP4Q8TDU9 374 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 CD81P60033 236 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 CITED4Q96RK1 184 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 A0A0J9YX75 114 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 K7EIL1 84 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 RGS13O14921 159 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 NMBP08949 121 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 C9orf47Q6ZRZ4 202 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 ZNF767PQ75MW2 155 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 APRG1Q8IVJ8 170 aa9.81□□□□□ -0.84
USP44-202ENST00000393091 MORN3Q6PF18 240 aaPredicted RBP9.8□□□□□ -0.84
USP44-202ENST00000393091 COX8CQ7Z4L0 72 aa9.8□□□□□ -0.84
USP44-202ENST00000393091 C16orf92Q96LL3 132 aa9.8□□□□□ -0.84
USP44-202ENST00000393091 LENEPQ9Y5L5 61 aa9.8□□□□□ -0.84
USP44-202ENST00000393091 FAM74A7A6NL05 159 aa9.8□□□□□ -0.84
USP44-202ENST00000393091 OR7C2O60412 319 aa9.8□□□□□ -0.84
USP44-202ENST00000393091 FAM213BQ8TBF2 198 aa9.8□□□□□ -0.84
USP44-202ENST00000393091 TEX46H3BTG2 121 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 DUSP14O95147 198 aaKnown RBP9.79□□□□□ -0.84
USP44-202ENST00000393091 CD7P09564 240 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 IFITM2Q01629 132 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 UBE2CO00762 179 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 GUCA2BQ16661 112 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 Q9H3A6 140 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 UBQLN2Q9UHD9 624 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 H3BMM0 161 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 AMTNQ6UX39 209 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 AAMDCQ9H7C9 122 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 KLF12Q9Y4X4 402 aa9.79□□□□□ -0.84
USP44-202ENST00000393091 C5orf17Q8NAS9 161 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms