RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 PIP4P2Q8N4L2 257 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 ARL6IP6Q8N6S5 226 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 CNTFRP26992 372 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 RHPN1-AS1Q9BWJ2 59 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 SLC25A2Q9BXI2 301 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 DPH3P1Q9H4G8 78 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 IGHV1-69DA0A0B4J2H0 117 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 IGHV1-69P01742 117 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 HAPLN4Q86UW8 402 aa10.16□□□□□ -0.78
CLTC-202ENST00000393043 ZNF688P0C7X2 276 aa10.15□□□□□ -0.78
CLTC-202ENST00000393043 ATP6V0E1O15342 81 aa10.15□□□□□ -0.78
CLTC-202ENST00000393043 NDUFS6O75380 124 aaKnown RBP10.15□□□□□ -0.78
CLTC-202ENST00000393043 MMP23AO75900 390 aa10.15□□□□□ -0.78
CLTC-202ENST00000393043 WT1-ASQ06250 92 aa10.15□□□□□ -0.78
CLTC-202ENST00000393043 WT1P19544 449 aaPredicted RBP10.15□□□□□ -0.78
CLTC-202ENST00000393043 LINC00479Q96M42 142 aa10.15□□□□□ -0.78
CLTC-202ENST00000393043 SPRY4Q9C004 299 aa10.15□□□□□ -0.78
CLTC-202ENST00000393043 C2orf16Q68DN1 1984 aa10.15□□□□□ -0.78
CLTC-202ENST00000393043 NCR2O95944 276 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 Q0VG73 95 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 PCNX2A6NKB5 2137 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 ZNF106Q9H2Y7 1883 aaKnown RBP10.14□□□□□ -0.79
CLTC-202ENST00000393043 DNAL4O96015 105 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 TMEM14CQ9P0S9 112 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 SPCS1Q9Y6A9 102 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 TRBV19A0A075B6N1 114 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 PYY3Q5JQD4 70 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 OR9G4Q8NGQ1 327 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 FGF23Q9GZV9 251 aaPredicted RBP10.14□□□□□ -0.79
CLTC-202ENST00000393043 JKAMPQ9P055 326 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 COL4A3Q01955 1670 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 BEX4Q9NWD9 120 aaPredicted RBP10.14□□□□□ -0.79
CLTC-202ENST00000393043 USF3Q68DE3 2245 aa10.14□□□□□ -0.79
CLTC-202ENST00000393043 THAP8Q8NA92 274 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 FAM231DQ6ZW35 169 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 YLPM1P49750 1951 aaKnown RBP10.13□□□□□ -0.79
CLTC-202ENST00000393043 FCN3O75636 299 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 TYMSP04818 313 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 PRB4P10163 310 aaPredicted RBP10.13□□□□□ -0.79
CLTC-202ENST00000393043 EMP1P54849 157 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 SEC11AP67812 179 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 TMEM249Q2WGJ8 235 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 APOMO95445 188 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 CD28P10747 220 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 HSD52Q0P140 79 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 C1orf122Q6ZSJ8 110 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 OR13C6PQ8NH95 151 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 ORAOV1Q8WV07 137 aa10.13□□□□□ -0.79
CLTC-202ENST00000393043 LHBP01229 141 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 ZNF415Q09FC8 603 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 WFDC12Q8WWY7 111 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 C11orf52Q96A22 123 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 RCHY1Q96PM5 261 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 TRGV4A0A0C4DH28 118 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 SHISA9B4DS77 424 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 OVOL3O00110 214 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 RUSC1-AS1Q66K80 236 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 IGFL4Q6B9Z1 124 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 GTSCR1Q86UQ5 136 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 WNK2Q9Y3S1 2297 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 C11orf44Q8N8P7 122 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 LYPD6BQ8NI32 183 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 DKK4Q9UBT3 224 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 VCYO14598 125 aa10.12□□□□□ -0.79
CLTC-202ENST00000393043 SP5Q6BEB4 398 aaPredicted RBP10.12□□□□□ -0.79
CLTC-202ENST00000393043 CACNA1BQ00975 2339 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 TRAV12-3A0A0B4J271 114 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 COL4A4P53420 1690 aaPredicted RBP10.11□□□□□ -0.79
CLTC-202ENST00000393043 PRR20EP86478 221 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 PRR20CP86479 221 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 PRR20DP86480 221 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 PRR20BP86481 221 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 PRR20AP86496 221 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 RNF182Q8N6D2 247 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 SAP30O75446 220 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 VWC2Q2TAL6 325 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 TOMM7Q9P0U1 55 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 H3BRN7 92 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 SYS1-DBNDD2H3BUS1 97 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 H3BUT2 72 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 DMRTA1Q5VZB9 504 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 TPSG1Q9NRR2 321 aa10.11□□□□□ -0.79
CLTC-202ENST00000393043 NHP2Q9NX24 153 aaKnown RBP10.11□□□□□ -0.79
CLTC-202ENST00000393043 SPTAN1Q13813 2472 aaKnown RBP10.1□□□□□ -0.79
CLTC-202ENST00000393043 CADP27708 2225 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 ZNF815PA8K554 130 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 TCF15Q12870 199 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 CYYR1Q96J86 154 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 OBSL1O75147 1896 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 NSUN5P1Q3KNT7 163 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 AMN1Q8IY45 258 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 A0A1B0GWB2 263 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 J3QLI3 93 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 IGHV2-70P01814 119 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 PLNP26678 52 aa10.1□□□□□ -0.79
CLTC-202ENST00000393043 IGLC1P0CG04 106 aa10.09□□□□□ -0.79
CLTC-202ENST00000393043 PCNX1Q96RV3 2341 aa10.09□□□□□ -0.79
CLTC-202ENST00000393043 ARMS2P0C7Q2 107 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms