RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 PRR20BP86481 221 aa13.04□□□□□ -0.32
CD9-204ENST00000382519 PRR20AP86496 221 aa13.04□□□□□ -0.32
CD9-204ENST00000382519 HIST1H1AQ02539 215 aaPredicted RBP13.04□□□□□ -0.32
CD9-204ENST00000382519 RAB31Q13636 194 aa13.04□□□□□ -0.32
CD9-204ENST00000382519 RAB32Q13637 225 aa13.04□□□□□ -0.32
CD9-204ENST00000382519 RRN3P1Q2M238 152 aa13.04□□□□□ -0.32
CD9-204ENST00000382519 FAM222AQ5U5X8 452 aa13.04□□□□□ -0.32
CD9-204ENST00000382519 C11orf1Q9H5F2 150 aa13.04□□□□□ -0.32
CD9-204ENST00000382519 UQCC1Q9NVA1 299 aa13.04□□□□□ -0.32
CD9-204ENST00000382519 UBE2L5PA0A1B0GUS4 154 aa13.03□□□□□ -0.32
CD9-204ENST00000382519 TEX48A0A1B0GUV7 120 aa13.03□□□□□ -0.32
CD9-204ENST00000382519 SNRPCP09234 159 aaKnown RBP13.03□□□□□ -0.32
CD9-204ENST00000382519 PRB4P10163 310 aaPredicted RBP13.03□□□□□ -0.32
CD9-204ENST00000382519 C10orf113Q5VZT2 155 aa13.03□□□□□ -0.32
CD9-204ENST00000382519 LCN15Q6UWW0 184 aa13.03□□□□□ -0.32
CD9-204ENST00000382519 NRARPQ7Z6K4 114 aa13.03□□□□□ -0.32
CD9-204ENST00000382519 STX12Q86Y82 276 aa13.03□□□□□ -0.32
CD9-204ENST00000382519 LYRM2Q9NU23 88 aaPredicted RBP13.03□□□□□ -0.32
CD9-204ENST00000382519 PPP1R14DQ9NXH3 145 aa13.03□□□□□ -0.32
CD9-204ENST00000382519 DKK2Q9UBU2 259 aa13.03□□□□□ -0.32
CD9-204ENST00000382519 IGSF23A1L1A6 192 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 BOLA2-SMG1P6H3BVE0 249 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 MRPS12O15235 138 aaKnown RBP13.02□□□□□ -0.33
CD9-204ENST00000382519 UPK1BO75841 260 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 CXCL2P19875 107 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 SULT1A1P50225 295 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 RHOBP62745 196 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 BAXQ07812 192 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 PSG3Q16557 428 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 MIC13Q5XKP0 118 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 Q6ZRG5 221 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 BPIFA4PQ86YQ2 179 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 BAP18Q8IXM2 172 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 GPN1Q9HCN4 374 aaPredicted RBP13.02□□□□□ -0.33
CD9-204ENST00000382519 WDR83OSQ9Y284 106 aa13.02□□□□□ -0.33
CD9-204ENST00000382519 YTHDF2Q9Y5A9 579 aaKnown RBP13.02□□□□□ -0.33
CD9-204ENST00000382519 HBG1P69891 147 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 HBG2P69892 147 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 OPCMLQ14982 345 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 MORN5Q5VZ52 161 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 OR8A1Q8NGG7 326 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 TMEM37Q8WXS4 190 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 RPUSD4Q96CM3 377 aaKnown RBP13.01□□□□□ -0.33
CD9-204ENST00000382519 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 NIPSNAP3BQ9BS92 247 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 NDUFAF3Q9BU61 184 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 PTTG2Q9NZH5 202 aa13.01□□□□□ -0.33
CD9-204ENST00000382519 TRAV12-2A0A075B6T6 113 aa13□□□□□ -0.33
CD9-204ENST00000382519 H3BTX0 84 aa13□□□□□ -0.33
CD9-204ENST00000382519 HTN3P15516 51 aa13□□□□□ -0.33
CD9-204ENST00000382519 S100A11P31949 105 aa13□□□□□ -0.33
CD9-204ENST00000382519 IL15RAQ13261 267 aa13□□□□□ -0.33
CD9-204ENST00000382519 TMEM252Q8N6L7 170 aa13□□□□□ -0.33
CD9-204ENST00000382519 KMT2AQ03164 3969 aa12.99□□□□□ -0.33
CD9-204ENST00000382519 A6NHS1 94 aa12.99□□□□□ -0.33
CD9-204ENST00000382519 ZNF705GA8MUZ8 300 aaPredicted RBP12.99□□□□□ -0.33
CD9-204ENST00000382519 CRXO43186 299 aaPredicted RBP12.99□□□□□ -0.33
CD9-204ENST00000382519 VWC2Q2TAL6 325 aa12.99□□□□□ -0.33
CD9-204ENST00000382519 OR1L4Q8NGR5 311 aa12.99□□□□□ -0.33
CD9-204ENST00000382519 DNAJC4Q9NNZ3 241 aa12.99□□□□□ -0.33
CD9-204ENST00000382519 ZNF331Q9NQX6 463 aaPredicted RBP12.99□□□□□ -0.33
CD9-204ENST00000382519 PLA2G2EQ9NZK7 142 aa12.99□□□□□ -0.33
CD9-204ENST00000382519 SLC17A3O00476 420 aa12.98□□□□□ -0.33
CD9-204ENST00000382519 SIX6O95475 246 aa12.98□□□□□ -0.33
CD9-204ENST00000382519 FGF7P21781 194 aa12.98□□□□□ -0.33
CD9-204ENST00000382519 B2MP61769 119 aa12.98□□□□□ -0.33
CD9-204ENST00000382519 PFDN5Q99471 154 aa12.98□□□□□ -0.33
CD9-204ENST00000382519 SLC39A9Q9NUM3 307 aa12.98□□□□□ -0.33
CD9-204ENST00000382519 TRAV5A0A0B4J249 113 aa12.97□□□□□ -0.33
CD9-204ENST00000382519 PRM2P04554 102 aa12.97□□□□□ -0.33
CD9-204ENST00000382519 DAD1P61803 113 aa12.97□□□□□ -0.33
CD9-204ENST00000382519 IGLC2P0DOY2 106 aa12.96□□□□□ -0.33
CD9-204ENST00000382519 RPL29P47914 159 aaKnown RBP12.96□□□□□ -0.33
CD9-204ENST00000382519 IFITM3Q01628 133 aa12.96□□□□□ -0.33
CD9-204ENST00000382519 ATP6V1FQ16864 119 aa12.96□□□□□ -0.33
CD9-204ENST00000382519 LRRC37A5PQ49AS3 106 aa12.96□□□□□ -0.33
CD9-204ENST00000382519 LINC01587Q99440 93 aa12.96□□□□□ -0.33
CD9-204ENST00000382519 PXMP4Q9Y6I8 212 aa12.96□□□□□ -0.33
CD9-204ENST00000382519 INMT-MINDY4F8WBC2 141 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 H3BQ15 152 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 PRAF2O60831 178 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 RLN2P04090 185 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 P0DMU3 169 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 OXA1LQ15070 435 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 TMEM256Q8N2U0 113 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
CD9-204ENST00000382519 PRAC2D3DTV9 90 aa12.94□□□□□ -0.34
CD9-204ENST00000382519 HTN1P15515 57 aa12.94□□□□□ -0.34
CD9-204ENST00000382519 CDKN1BP46527 198 aa12.94□□□□□ -0.34
CD9-204ENST00000382519 GUK1Q16774 197 aa12.94□□□□□ -0.34
CD9-204ENST00000382519 THAP6Q8TBB0 222 aa12.94□□□□□ -0.34
CD9-204ENST00000382519 NMES1Q9C002 83 aa12.94□□□□□ -0.34
CD9-204ENST00000382519 VPS13DQ5THJ4 4388 aa12.93□□□□□ -0.34
CD9-204ENST00000382519 E5RGE8 158 aa12.93□□□□□ -0.34
CD9-204ENST00000382519 MPDU1O75352 247 aa12.93□□□□□ -0.34
CD9-204ENST00000382519 TSPOP30536 169 aa12.93□□□□□ -0.34
CD9-204ENST00000382519 NHLH2Q02577 135 aa12.93□□□□□ -0.34
CD9-204ENST00000382519 POM121L12Q8N7R1 296 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms