RNA–Protein interactions for RNA: ENST00000382438.5

NKX3-2-201, Transcript of NK3 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX3-2, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-2-201ENST00000382438 TEX29Q8N6K0 151 aa16.71■□□□□ 0.27
NKX3-2-201ENST00000382438 DCHS1Q96JQ0 3298 aa16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 LTBRP36941 435 aa16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 C1orf122Q6ZSJ8 110 aa16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 RND1Q92730 232 aa16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 HIF1ANQ9NWT6 349 aa16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 DSPP15924 2871 aaKnown RBP16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 CCDC179H3BU77 68 aa16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 IGLV2-11P01706 119 aa16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 MRPL51Q4U2R6 128 aaKnown RBP16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 KLF17Q5JT82 389 aaPredicted RBP16.7■□□□□ 0.26
NKX3-2-201ENST00000382438 IGHV3-21A0A0B4J1V1 117 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 SAA1P0DJI8 122 aaPredicted RBP16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 FOXC2Q99958 501 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 A0A1W2PQM1 296 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 MAGEA5P43359 124 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 PSMB2P49721 201 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 C10orf55Q5SWW7 151 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 FAM104BQ5XKR9 115 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 CLEC3BP05452 202 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 LYZL1Q6UWQ5 148 aa16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 KLF14Q8TD94 323 aaPredicted RBP16.69■□□□□ 0.26
NKX3-2-201ENST00000382438 WDFY4Q6ZS81 3184 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 TRAV40A0A0B4J280 105 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 TMEM8BA6NDV4 472 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 CKS2P33552 79 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 DIAPH2-AS1Q14236 149 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 GUSBP11Q6P575 273 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 IGHV5-10-1A0A0J9YXX1 117 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 ERHP84090 104 aaKnown RBP16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 SPINK14Q6IE38 97 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 MORN3Q6PF18 240 aaPredicted RBP16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 CALYQ9NYX4 217 aa16.68■□□□□ 0.26
NKX3-2-201ENST00000382438 IQCF6A8MYZ5 107 aa16.67■□□□□ 0.26
NKX3-2-201ENST00000382438 LEPP41159 167 aa16.67■□□□□ 0.26
NKX3-2-201ENST00000382438 LOC107984156A0A0G2JMH3 177 aa16.67■□□□□ 0.26
NKX3-2-201ENST00000382438 CRIP1P50238 77 aa16.67■□□□□ 0.26
NKX3-2-201ENST00000382438 ZFP2Q6ZN57 461 aa16.67■□□□□ 0.26
NKX3-2-201ENST00000382438 ARL17AQ8IVW1 177 aa16.67■□□□□ 0.26
NKX3-2-201ENST00000382438 PIFOQ8TCI5 191 aa16.67■□□□□ 0.26
NKX3-2-201ENST00000382438 ZFHX4Q86UP3 3567 aa16.66■□□□□ 0.26
NKX3-2-201ENST00000382438 IGKV1D-17A0A075B6S4 117 aa16.66■□□□□ 0.26
NKX3-2-201ENST00000382438 GAS8-AS1O95177 125 aa16.66■□□□□ 0.26
NKX3-2-201ENST00000382438 GP9P14770 177 aa16.66■□□□□ 0.26
NKX3-2-201ENST00000382438 ZMAT4Q9H898 229 aa16.66■□□□□ 0.26
NKX3-2-201ENST00000382438 GATD1Q8NB37 220 aa16.65■□□□□ 0.26
NKX3-2-201ENST00000382438 ATP6V0E2Q8NHE4 81 aa16.65■□□□□ 0.26
NKX3-2-201ENST00000382438 ICE1Q9Y2F5 2266 aa16.65■□□□□ 0.26
NKX3-2-201ENST00000382438 WT1-ASQ06250 92 aa16.65■□□□□ 0.26
NKX3-2-201ENST00000382438 SRSF1Q07955 248 aaKnown RBP eCLIP16.65■□□□□ 0.26
NKX3-2-201ENST00000382438 PEAR1Q5VY43 1037 aaPredicted RBP16.65■□□□□ 0.26
NKX3-2-201ENST00000382438 RITA1Q96K30 269 aa16.65■□□□□ 0.26
NKX3-2-201ENST00000382438 U3KQK5 164 aa16.65■□□□□ 0.26
NKX3-2-201ENST00000382438 TNFRSF1AP19438 455 aa16.64■□□□□ 0.25
NKX3-2-201ENST00000382438 ZNF493Q6ZR52 646 aa16.64■□□□□ 0.25
NKX3-2-201ENST00000382438 TGFAP01135 160 aa16.64■□□□□ 0.25
NKX3-2-201ENST00000382438 EVI2AP22794 236 aa16.64■□□□□ 0.25
NKX3-2-201ENST00000382438 POU2AF1Q16633 256 aa16.64■□□□□ 0.25
NKX3-2-201ENST00000382438 MOGAT3Q86VF5 341 aa16.64■□□□□ 0.25
NKX3-2-201ENST00000382438 DLX4Q92988 240 aaPredicted RBP16.64■□□□□ 0.25
NKX3-2-201ENST00000382438 CXXC4Q9H2H0 198 aa16.64■□□□□ 0.25
NKX3-2-201ENST00000382438 HOXA3O43365 443 aaPredicted RBP16.63■□□□□ 0.25
NKX3-2-201ENST00000382438 AJUBAQ96IF1 538 aa16.63■□□□□ 0.25
NKX3-2-201ENST00000382438 NDUFA4L2Q9NRX3 87 aa16.63■□□□□ 0.25
NKX3-2-201ENST00000382438 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.63■□□□□ 0.25
NKX3-2-201ENST00000382438 HES7Q9BYE0 225 aa16.63■□□□□ 0.25
NKX3-2-201ENST00000382438 DSCAML1Q8TD84 2053 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 DPM2O94777 84 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 APELAP0DMC3 54 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 C17orf58Q2M2W7 97 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 OR10X1Q8NGY0 326 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 MEOX1P50221 254 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 Q0VFX4 171 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 PPDPFLQ8WWR9 84 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 SSUH2Q9Y2M2 353 aa16.62■□□□□ 0.25
NKX3-2-201ENST00000382438 GAGE12JA6NER3 117 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 H3BVH4 76 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 TIMM8AO60220 97 aaPredicted RBP16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 GAGE7O76087 117 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 IL4P05112 153 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 GAGE12FP0CL80 117 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 GAGE12GP0CL81 117 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 GAGE12IP0CL82 117 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 GAGE4Q13068 117 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 C8orf49Q96NF6 230 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 MRPL35Q9NZE8 188 aaKnown RBP16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 PRTN3P24158 256 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 C17orf77Q96MU5 243 aa16.61■□□□□ 0.25
NKX3-2-201ENST00000382438 LINC01549A6NIU2 74 aa16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 VSTM5A8MXK1 200 aa16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 C1orf210Q8IVY1 113 aa16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 TRBV7-3A0A075B6L6 115 aa16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 ATP5IP56385 69 aaPredicted RBP16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 HCP5Q6MZN7 132 aa16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 TNFRSF18Q9Y5U5 241 aa16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 FAM201AQ5SY85 155 aa16.6■□□□□ 0.25
NKX3-2-201ENST00000382438 NDUFA3O95167 84 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 ID1P41134 155 aa16.59■□□□□ 0.25
NKX3-2-201ENST00000382438 DUX4L9Q6RFH8 374 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms