RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 H3BTX0 84 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 DUSP14O95147 198 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 CNN1P51911 297 aaKnown RBP8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 RHOBP62745 196 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 HIST1H1AQ02539 215 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 IL15RAQ13261 267 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 BPIFA4PQ86YQ2 179 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 OR1L4Q8NGR5 311 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 C2CD4CQ8TF44 421 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 TMEM37Q8WXS4 190 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 LINC00476Q8WZB0 136 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 TMEM208Q9BTX3 173 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 SLC25A31Q9H0C2 315 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 OR5AC2Q9NZP5 309 aa8.36□□□□□ -1.07
SMARCE1-203ENST00000377808 IGLL5B9A064 214 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 CYCSP99999 105 aaKnown RBP8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 NHLH2Q02577 135 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 CLINT1Q14677 625 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 OPCMLQ14982 345 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 ATP6V1FQ16864 119 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 SPINK13Q1W4C9 94 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 VWC2Q2TAL6 325 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 MORN5Q5VZ52 161 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 LCN15Q6UWW0 184 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 Q6ZTC4 211 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 OR5C1Q8NGR4 320 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 THAP6Q8TBB0 222 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 PFDN5Q99471 154 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 MARVELD1Q9BSK0 173 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 HRH4Q9H3N8 390 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 DNAJC4Q9NNZ3 241 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 SLC39A9Q9NUM3 307 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 CELA1Q9UNI1 258 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 PXMP4Q9Y6I8 212 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 DNAH1Q9P2D7 4330 aa8.35□□□□□ -1.07
SMARCE1-203ENST00000377808 TRAV5A0A0B4J249 113 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 C11orf94C9JXX5 98 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 M0R2Z0 102 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 CXCL3P19876 107 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 PRR20EP86478 221 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 PRR20CP86479 221 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 PRR20DP86480 221 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 PRR20BP86481 221 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 PRR20AP86496 221 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 PSG3Q16557 428 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 ZNF705AQ6ZN79 300 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 OR11H7Q8NGC8 314 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 RFNGQ9Y644 331 aa8.34□□□□□ -1.07
SMARCE1-203ENST00000377808 TRAV12-2A0A075B6T6 113 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 TRAV10A0A0B4J240 114 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 MRPS12O15235 138 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 INSP01308 110 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 HBE1P02100 147 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 PET100P0DJ07 73 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 CXCL2P19875 107 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 RPL29P47914 159 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 H2BFSP57053 126 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 BAP18Q8IXM2 172 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 OR8A1Q8NGG7 326 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 PPP1R1CQ8WVI7 109 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 RPUSD4Q96CM3 377 aaKnown RBP8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 SLC50A1Q9BRV3 221 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 NPCDR1Q9BY65 106 aa8.33□□□□□ -1.08
SMARCE1-203ENST00000377808 LOC102723971A0A1B0GUV8 181 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 TMEM189A5PLL7 270 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 SMIM9A6NGZ8 99 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 ZNF705FA8MVS1 300 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 H0YIZ8 118 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 BOLA2-SMG1P6H3BVE0 249 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 SLC17A3O00476 420 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 MPDU1O75352 247 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 AMBPP02760 352 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 RRN3P1Q2M238 152 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 C12orf74Q32Q52 190 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 C1orf158Q8N1D5 194 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 IGF2BP2-AS1Q96M15 143 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 NEU1Q99519 415 aa8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 ZNF331Q9NQX6 463 aaPredicted RBP8.32□□□□□ -1.08
SMARCE1-203ENST00000377808 DEFB131BA0A096LNP1 70 aa8.31□□□□□ -1.08
SMARCE1-203ENST00000377808 H3BQ15 152 aa8.31□□□□□ -1.08
SMARCE1-203ENST00000377808 SPART-AS1P0CW21 52 aa8.31□□□□□ -1.08
SMARCE1-203ENST00000377808 GCSAMLQ5JQS6 135 aa8.31□□□□□ -1.08
SMARCE1-203ENST00000377808 AMTNQ6UX39 209 aa8.31□□□□□ -1.08
SMARCE1-203ENST00000377808 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
SMARCE1-203ENST00000377808 SMIM3Q9BZL3 60 aa8.31□□□□□ -1.08
SMARCE1-203ENST00000377808 A8MTW9 85 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 ZNF705GA8MUZ8 300 aaPredicted RBP8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 MPC2O95563 127 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 IGLC2P0DOY2 106 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 HTN1P15515 57 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 HTN3P15516 51 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 FAM222AQ5U5X8 452 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 BLNKQ8WV28 456 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 KCNIP2Q9NS61 270 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 MBD2Q9UBB5 411 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 YTHDF2Q9Y5A9 579 aaKnown RBP8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 ALG5Q9Y673 324 aa8.3□□□□□ -1.08
SMARCE1-203ENST00000377808 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
SMARCE1-203ENST00000377808 PRAC2D3DTV9 90 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms