RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 KCNIP4Q6PIL6 250 aa13.61□□□□□ -0.23
CTTN-203ENST00000376561 IMMP2LQ96T52 175 aa13.61□□□□□ -0.23
CTTN-203ENST00000376561 ZNF207O43670 478 aaKnown RBP13.6□□□□□ -0.23
CTTN-203ENST00000376561 C10orf99Q6UWK7 81 aa13.6□□□□□ -0.23
CTTN-203ENST00000376561 C1QL4Q86Z23 238 aa13.6□□□□□ -0.23
CTTN-203ENST00000376561 A0A1W2PPQ1 181 aa13.6□□□□□ -0.23
CTTN-203ENST00000376561 TMEM89A2RUT3 159 aa13.6□□□□□ -0.23
CTTN-203ENST00000376561 NDUFA4O00483 81 aa13.6□□□□□ -0.23
CTTN-203ENST00000376561 APOHP02749 345 aaPredicted RBP13.6□□□□□ -0.23
CTTN-203ENST00000376561 FAM3BP58499 235 aaPredicted RBP13.6□□□□□ -0.23
CTTN-203ENST00000376561 GPR82Q96P67 336 aa13.6□□□□□ -0.23
CTTN-203ENST00000376561 RNASE7Q9H1E1 156 aaKnown RBP13.6□□□□□ -0.23
CTTN-203ENST00000376561 AAMDCQ9H7C9 122 aa13.6□□□□□ -0.23
CTTN-203ENST00000376561 IGHV3-66A0A0C4DH42 116 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 GGCTO75223 188 aaKnown RBP13.59□□□□□ -0.23
CTTN-203ENST00000376561 PSG9Q00887 426 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 FOXL1Q12952 345 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 C1orf194Q5T5A4 169 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 GOLT1AQ6ZVE7 132 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 SMIM12Q96EX1 92 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 OSTCQ9NRP0 149 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 U3KQE9 123 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 V9GYV3 84 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 M0R3E3 92 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 UNQ9165/PRO28630Q6UXU0 137 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 HECTD1Q9ULT8 2610 aa13.59□□□□□ -0.23
CTTN-203ENST00000376561 AKAP9Q99996 3911 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 FASNP49327 2511 aaKnown RBP13.58□□□□□ -0.24
CTTN-203ENST00000376561 SONP18583 2426 aaKnown RBP13.58□□□□□ -0.24
CTTN-203ENST00000376561 IGHV3OR16-13A0A075B7E8 117 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 IGHV3-49A0A0A0MS15 119 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 TRAV8-1A0A0A6YYK1 113 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 IGHV3-74A0A0B4J1X5 117 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 ZNF253O75346 499 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 LTAP01374 205 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 FAM209BQ5JX69 171 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 IBA57Q5T440 356 aaKnown RBP13.58□□□□□ -0.24
CTTN-203ENST00000376561 TMEM86BQ8N661 226 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 IGLV2-11P01706 119 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 SLC35B1P78383 322 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 MLST8Q9BVC4 326 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 YAE1D1Q9NRH1 226 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 IL36BQ9NZH7 164 aa13.58□□□□□ -0.24
CTTN-203ENST00000376561 A0A087X0K7 114 aa13.57□□□□□ -0.24
CTTN-203ENST00000376561 Q8N2B8 174 aa13.57□□□□□ -0.24
CTTN-203ENST00000376561 ZNF785A8K8V0 405 aa13.56□□□□□ -0.24
CTTN-203ENST00000376561 DIRC3C9JPN6 131 aa13.56□□□□□ -0.24
CTTN-203ENST00000376561 Q86TA4 180 aa13.56□□□□□ -0.24
CTTN-203ENST00000376561 PEF1Q9UBV8 284 aaKnown RBP13.56□□□□□ -0.24
CTTN-203ENST00000376561 K7EQM0 130 aa13.56□□□□□ -0.24
CTTN-203ENST00000376561 TRGC2P03986 189 aa13.56□□□□□ -0.24
CTTN-203ENST00000376561 TMEM75Q8N9X5 138 aa13.56□□□□□ -0.24
CTTN-203ENST00000376561 SRD5A3Q9H8P0 318 aa13.56□□□□□ -0.24
CTTN-203ENST00000376561 ZNF331Q9NQX6 463 aaPredicted RBP13.56□□□□□ -0.24
CTTN-203ENST00000376561 ACANP16112 2415 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 RPLP1P05386 114 aaKnown RBP13.55□□□□□ -0.24
CTTN-203ENST00000376561 FOXE3Q13461 319 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 FAM231DQ6ZW35 169 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 TRBV6-1A0A0K0K1D8 114 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 ELANEP08246 267 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 PRB4P10163 310 aaPredicted RBP13.55□□□□□ -0.24
CTTN-203ENST00000376561 CSN1S1P47710 185 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 PRR27Q6MZM9 219 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 PRNTQ86SH4 94 aa13.55□□□□□ -0.24
CTTN-203ENST00000376561 ZNF320A2RRD8 509 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 TYMSP04818 313 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 PSG3Q16557 428 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 RPEL1Q2QD12 228 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 C16orf54Q6UWD8 224 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 BTF3L4Q96K17 158 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 ZNF705GA8MUZ8 300 aaPredicted RBP13.54□□□□□ -0.24
CTTN-203ENST00000376561 IGFL4Q6B9Z1 124 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 TMEM183AQ8IXX5 376 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 ARL6IP6Q8N6S5 226 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 NUDT10Q8NFP7 164 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 NUDT11Q96G61 164 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 SERTAD4Q9NUC0 356 aa13.54□□□□□ -0.24
CTTN-203ENST00000376561 MYOZ3Q8TDC0 251 aa13.53□□□□□ -0.24
CTTN-203ENST00000376561 GLMPQ8WWB7 406 aa13.53□□□□□ -0.24
CTTN-203ENST00000376561 PSG8Q9UQ74 426 aa13.53□□□□□ -0.24
CTTN-203ENST00000376561 SERTM2A0A1B0GWG4 89 aa13.52□□□□□ -0.24
CTTN-203ENST00000376561 DNAJC9-AS1A6NH13 148 aa13.52□□□□□ -0.24
CTTN-203ENST00000376561 HLA-DMBP28068 263 aa13.52□□□□□ -0.24
CTTN-203ENST00000376561 TRAV9-1A0A075B6T8 112 aa13.52□□□□□ -0.25
CTTN-203ENST00000376561 RNF152Q8N8N0 203 aa13.52□□□□□ -0.25
CTTN-203ENST00000376561 SLC50A1Q9BRV3 221 aa13.52□□□□□ -0.25
CTTN-203ENST00000376561 BIN3Q9NQY0 253 aa13.52□□□□□ -0.25
CTTN-203ENST00000376561 CHEK1O14757 476 aa13.51□□□□□ -0.25
CTTN-203ENST00000376561 GATCO43716 136 aaKnown RBP13.51□□□□□ -0.25
CTTN-203ENST00000376561 MEOX2P50222 304 aa13.51□□□□□ -0.25
CTTN-203ENST00000376561 LINC00322Q6ZN03 302 aaPredicted RBP13.51□□□□□ -0.25
CTTN-203ENST00000376561 Q71RC1 249 aaPredicted RBP13.51□□□□□ -0.25
CTTN-203ENST00000376561 ZFP30Q9Y2G7 519 aa13.51□□□□□ -0.25
CTTN-203ENST00000376561 MYO9AB2RTY4 2548 aa13.51□□□□□ -0.25
CTTN-203ENST00000376561 FAM181BA6NEQ2 426 aa13.51□□□□□ -0.25
CTTN-203ENST00000376561 PHOX2AO14813 284 aa13.51□□□□□ -0.25
CTTN-203ENST00000376561 CA1P00915 261 aaPredicted RBP13.51□□□□□ -0.25
CTTN-203ENST00000376561 GPHB5Q86YW7 130 aa13.51□□□□□ -0.25
CTTN-203ENST00000376561 DAZ1Q9NQZ3 744 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms