RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 H0YIZ8 118 aa16.33■□□□□ 0.2
COL9A2-201ENST00000372736 HLA-DMBP28068 263 aa16.33■□□□□ 0.2
COL9A2-201ENST00000372736 CNN1P51911 297 aaKnown RBP16.33■□□□□ 0.2
COL9A2-201ENST00000372736 ZNF738Q8NE65 137 aa16.33■□□□□ 0.2
COL9A2-201ENST00000372736 CHAC2Q8WUX2 184 aa16.33■□□□□ 0.2
COL9A2-201ENST00000372736 NEU1Q99519 415 aa16.33■□□□□ 0.2
COL9A2-201ENST00000372736 CELA1Q9UNI1 258 aa16.33■□□□□ 0.2
COL9A2-201ENST00000372736 HYDINQ4G0P3 5121 aa16.33■□□□□ 0.2
COL9A2-201ENST00000372736 E5RGE8 158 aa16.32■□□□□ 0.2
COL9A2-201ENST00000372736 CXCL2P19875 107 aa16.32■□□□□ 0.2
COL9A2-201ENST00000372736 FGF7P21781 194 aa16.32■□□□□ 0.2
COL9A2-201ENST00000372736 RPL29P47914 159 aaKnown RBP16.32■□□□□ 0.2
COL9A2-201ENST00000372736 ATP6V1FQ16864 119 aa16.32■□□□□ 0.2
COL9A2-201ENST00000372736 Q6ZRG5 221 aa16.32■□□□□ 0.2
COL9A2-201ENST00000372736 DNAJC4Q9NNZ3 241 aa16.32■□□□□ 0.2
COL9A2-201ENST00000372736 SLC39A9Q9NUM3 307 aa16.32■□□□□ 0.2
COL9A2-201ENST00000372736 RLN2P04090 185 aa16.31■□□□□ 0.2
COL9A2-201ENST00000372736 B2MP61769 119 aa16.31■□□□□ 0.2
COL9A2-201ENST00000372736 CYCSP99999 105 aaKnown RBP16.31■□□□□ 0.2
COL9A2-201ENST00000372736 NHLH2Q02577 135 aa16.31■□□□□ 0.2
COL9A2-201ENST00000372736 LCN15Q6UWW0 184 aa16.31■□□□□ 0.2
COL9A2-201ENST00000372736 BPIFA4PQ86YQ2 179 aa16.31■□□□□ 0.2
COL9A2-201ENST00000372736 IGHV3OR16-12A0A075B7B8 117 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 SSNA1O43805 119 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 DUSP14O95147 198 aaKnown RBP16.3■□□□□ 0.2
COL9A2-201ENST00000372736 IGLC2P0DOY2 106 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 PSG3Q16557 428 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 C1orf158Q8N1D5 194 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 OR11H7Q8NGC8 314 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 OR5C1Q8NGR4 320 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 OR1L4Q8NGR5 311 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 PPP1R1CQ8WVI7 109 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 PFDN5Q99471 154 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 SLC25A31Q9H0C2 315 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 PXMP4Q9Y6I8 212 aa16.3■□□□□ 0.2
COL9A2-201ENST00000372736 SLC17A3O00476 420 aa16.29■□□□□ 0.2
COL9A2-201ENST00000372736 SNRPCP09234 159 aaKnown RBP16.29■□□□□ 0.2
COL9A2-201ENST00000372736 Q6ZTC4 211 aa16.29■□□□□ 0.2
COL9A2-201ENST00000372736 LRRC20Q8TCA0 184 aa16.29■□□□□ 0.2
COL9A2-201ENST00000372736 SLC50A1Q9BRV3 221 aa16.29■□□□□ 0.2
COL9A2-201ENST00000372736 NPCDR1Q9BY65 106 aa16.29■□□□□ 0.2
COL9A2-201ENST00000372736 ZNF331Q9NQX6 463 aaPredicted RBP16.29■□□□□ 0.2
COL9A2-201ENST00000372736 TRAV5A0A0B4J249 113 aa16.28■□□□□ 0.2
COL9A2-201ENST00000372736 SMIM9A6NGZ8 99 aa16.28■□□□□ 0.2
COL9A2-201ENST00000372736 C11orf94C9JXX5 98 aa16.28■□□□□ 0.2
COL9A2-201ENST00000372736 MPDU1O75352 247 aa16.28■□□□□ 0.2
COL9A2-201ENST00000372736 OR8A1Q8NGG7 326 aa16.28■□□□□ 0.2
COL9A2-201ENST00000372736 GOLT1BQ9Y3E0 138 aa16.28■□□□□ 0.2
COL9A2-201ENST00000372736 H3BQ15 152 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 H3BTX0 84 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 M0R2Z0 102 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 LY6G6CO95867 125 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 PRB4P10163 310 aaPredicted RBP16.27■□□□□ 0.2
COL9A2-201ENST00000372736 HIST1H1AQ02539 215 aaPredicted RBP16.27■□□□□ 0.2
COL9A2-201ENST00000372736 SPINK13Q1W4C9 94 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 THAP6Q8TBB0 222 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 C2CD4CQ8TF44 421 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 IGF2BP2-AS1Q96M15 143 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 RFNGQ9Y644 331 aa16.27■□□□□ 0.2
COL9A2-201ENST00000372736 CRXO43186 299 aaPredicted RBP16.26■□□□□ 0.19
COL9A2-201ENST00000372736 AMBPP02760 352 aa16.26■□□□□ 0.19
COL9A2-201ENST00000372736 CLINT1Q14677 625 aa16.26■□□□□ 0.19
COL9A2-201ENST00000372736 C12orf74Q32Q52 190 aa16.26■□□□□ 0.19
COL9A2-201ENST00000372736 RPUSD4Q96CM3 377 aaKnown RBP16.26■□□□□ 0.19
COL9A2-201ENST00000372736 RNF126Q9BV68 326 aa16.26■□□□□ 0.19
COL9A2-201ENST00000372736 TMEM189A5PLL7 270 aa16.25■□□□□ 0.19
COL9A2-201ENST00000372736 BOLA2-SMG1P6H3BVE0 249 aa16.25■□□□□ 0.19
COL9A2-201ENST00000372736 MPC2O95563 127 aa16.25■□□□□ 0.19
COL9A2-201ENST00000372736 ZNF767PQ75MW2 155 aa16.25■□□□□ 0.19
COL9A2-201ENST00000372736 SAT2Q96F10 170 aaPredicted RBP16.25■□□□□ 0.19
COL9A2-201ENST00000372736 TRAV10A0A0B4J240 114 aa16.24■□□□□ 0.19
COL9A2-201ENST00000372736 GCSAMLQ5JQS6 135 aa16.24■□□□□ 0.19
COL9A2-201ENST00000372736 BAP18Q8IXM2 172 aa16.24■□□□□ 0.19
COL9A2-201ENST00000372736 PTTG1O95997 202 aa16.23■□□□□ 0.19
COL9A2-201ENST00000372736 INSP01308 110 aa16.23■□□□□ 0.19
COL9A2-201ENST00000372736 HBE1P02100 147 aa16.23■□□□□ 0.19
COL9A2-201ENST00000372736 PET100P0DJ07 73 aa16.23■□□□□ 0.19
COL9A2-201ENST00000372736 EMP1P54849 157 aa16.23■□□□□ 0.19
COL9A2-201ENST00000372736 WDR61Q9GZS3 305 aaKnown RBP16.23■□□□□ 0.19
COL9A2-201ENST00000372736 ALG5Q9Y673 324 aa16.23■□□□□ 0.19
COL9A2-201ENST00000372736 GUK1Q16774 197 aa16.22■□□□□ 0.19
COL9A2-201ENST00000372736 ZNF586Q9NXT0 402 aa16.22■□□□□ 0.19
COL9A2-201ENST00000372736 MBD2Q9UBB5 411 aa16.22■□□□□ 0.19
COL9A2-201ENST00000372736 TRAV12-2A0A075B6T6 113 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 LOC102723971A0A1B0GUV8 181 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 IGLL5B9A064 214 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 PRAC2D3DTV9 90 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 ZNF253O75346 499 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 SPART-AS1P0CW21 52 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 TCTAP57738 103 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 RHOBP62745 196 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 RRN3P1Q2M238 152 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 LGALS9CQ6DKI2 356 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 ATP5SQ99766 215 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 TMEM208Q9BTX3 173 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 TMEM14CQ9P0S9 112 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 APLNQ9ULZ1 77 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 HSPB11Q9Y547 144 aa16.21■□□□□ 0.19
COL9A2-201ENST00000372736 DKK2Q9UBU2 259 aa16.2■□□□□ 0.18
COL9A2-201ENST00000372736 TRBV19A0A075B6N1 114 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms