RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 C8orf88P0DMB2 117 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 GCHFRP30047 84 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 CNN1P51911 297 aaKnown RBP6.76□□□□□ -1.33
TPM3-213ENST00000368545 YPEL3P61236 119 aaPredicted RBP6.76□□□□□ -1.33
TPM3-213ENST00000368545 DEFA5Q01523 94 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 SOHLH1Q5JUK2 328 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 S100A7AQ86SG5 101 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 NECAP1Q8NC96 275 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 TMEM37Q8WXS4 190 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 FAM223BA6NKX1 122 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 G3V318 75 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 TMEM250H0YL14 139 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 HYPMO75409 117 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 IGKV1-17P01599 117 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 RD3LP0DJH9 198 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 C15orf32Q32M92 178 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 Q56UQ5 140 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 MIR17HGQ75NE6 70 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 FAM223AQ8IWN6 122 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 STXBP6Q8NFX7 210 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 OR51G1Q8NGK1 321 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 TMPRSS5Q9H3S3 457 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 ZNF355PQ9NSJ1 428 aa6.76□□□□□ -1.33
TPM3-213ENST00000368545 TRBV7-1A0A0A6YYK4 115 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 LINC01548A6NM66 108 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 F8WDY8 70 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 PDE6DO43924 150 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 OR7C2O60412 319 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 EIF3GO75821 320 aaKnown RBP eCLIP6.75□□□□□ -1.33
TPM3-213ENST00000368545 NDUFB8O95169 186 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 PSG1P11464 419 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 RHOGP84095 191 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 TIGITQ495A1 244 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 KPRPQ5T749 579 aaPredicted RBP6.75□□□□□ -1.33
TPM3-213ENST00000368545 SPATA31B1PQ5VZV4 182 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 SIGLEC15Q6ZMC9 328 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 Q75L30 129 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 LINC00305Q7Z4B0 112 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 CYB561D1Q8N8Q1 229 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 OR1B1Q8NGR6 318 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 EEF1AKMT3Q96AZ1 226 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 DOK5Q9P104 306 aa6.75□□□□□ -1.33
TPM3-213ENST00000368545 ZNF469Q96JG9 3925 aaPredicted RBP6.75□□□□□ -1.33
TPM3-213ENST00000368545 C11orf94C9JXX5 98 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 ORM2P19652 201 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 LYZP61626 148 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 PATE2Q6UY27 113 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 LCNL1Q6ZST4 164 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 NKX6-2Q9C056 277 aaPredicted RBP6.74□□□□□ -1.33
TPM3-213ENST00000368545 HIGD1AQ9Y241 93 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 F6UZH7 168 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 NUPL2O15504 423 aaKnown RBP6.74□□□□□ -1.33
TPM3-213ENST00000368545 S100A7P31151 101 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 GUCA2BQ16661 112 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 Q6ZSV7 163 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 IL17RELQ6ZVW7 336 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 TMEM86BQ8N661 226 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 OR5AU1Q8NGC0 362 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 ZNF502Q8TBZ5 544 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 Q8WTZ3 238 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 NIPSNAP3BQ9BS92 247 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 SLC25A2Q9BXI2 301 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 RNF24Q9Y225 148 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 PAM16Q9Y3D7 125 aa6.74□□□□□ -1.33
TPM3-213ENST00000368545 ZANQ9Y493 2812 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 A0A087X0K7 114 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 BLCAPP62952 87 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 FAM74A3Q4VXF1 159 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 OR4F5Q8NH21 305 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 USMG5Q96IX5 58 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 UHRF2Q96PU4 802 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 OR4F4Q96R69 305 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 PAXXQ9BUH6 204 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 WI2-2373I1.2A0A1W2PRP0 233 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 OR2T8A6NH00 312 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 CLDN34H7C241 214 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 IL4P05112 153 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 CEBPGP53567 150 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 UBE2G2P60604 165 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 UBE2L3P68036 154 aaKnown RBP6.73□□□□□ -1.33
TPM3-213ENST00000368545 ATP5G2Q06055 141 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 ZNF491Q8N8L2 437 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 OR51M1Q9H341 326 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 MRPL27Q9P0M9 148 aaKnown RBP6.73□□□□□ -1.33
TPM3-213ENST00000368545 S4R3C0 116 aa6.73□□□□□ -1.33
TPM3-213ENST00000368545 A0A1W2PRE2 83 aa6.72□□□□□ -1.33
TPM3-213ENST00000368545 FAM74A7A6NL05 159 aa6.72□□□□□ -1.33
TPM3-213ENST00000368545 TRGV3P03979 118 aa6.72□□□□□ -1.33
TPM3-213ENST00000368545 SEC61BP60468 96 aaKnown RBP6.72□□□□□ -1.33
TPM3-213ENST00000368545 MORN5Q5VZ52 161 aa6.72□□□□□ -1.33
TPM3-213ENST00000368545 Q8N3U1 123 aa6.72□□□□□ -1.33
TPM3-213ENST00000368545 SLC25A39Q9BZJ4 359 aaPredicted RBP6.72□□□□□ -1.33
TPM3-213ENST00000368545 PRSS22Q9GZN4 317 aa6.72□□□□□ -1.33
TPM3-213ENST00000368545 Q9H8V8 135 aa6.72□□□□□ -1.33
TPM3-213ENST00000368545 A0A0G2JLM5 398 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 C3orf84H3BNL1 204 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 H3BRN7 92 aa6.71□□□□□ -1.33
TPM3-213ENST00000368545 BMPR1BO00238 502 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms