RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 OSR1Q8TAX0 266 aaPredicted RBP8.47□□□□□ -1.05
TPM3-212ENST00000368533 SSBP4Q9BWG4 385 aaPredicted RBP8.47□□□□□ -1.05
TPM3-212ENST00000368533 MXRA5Q9NR99 2828 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 A0A1W2PPI3 338 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 PYYP10082 97 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 AREGP15514 252 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 SSBP2P81877 361 aaPredicted RBP8.46□□□□□ -1.05
TPM3-212ENST00000368533 POU2AF1Q16633 256 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 C2orf83Q53S99 150 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 FAM120AOSQ5T036 256 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 LINC00311Q8N616 119 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 LINC00479Q96M42 142 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 PIMREGQ9BSJ6 248 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 DPM3Q9P2X0 92 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 V9GYV3 84 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 CUBNO60494 3623 aa8.46□□□□□ -1.05
TPM3-212ENST00000368533 FLNAP21333 2647 aaKnown RBP8.46□□□□□ -1.06
TPM3-212ENST00000368533 GAGE10A6NGK3 116 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 GGTLC3B5MD39 225 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 ORM2P19652 201 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 MORN5Q5VZ52 161 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 PDPNQ86YL7 162 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 DEFB125Q8N687 156 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 C8orf46Q8TAG6 207 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 SGK494Q96LW2 274 aa8.46□□□□□ -1.06
TPM3-212ENST00000368533 MRPL27Q9P0M9 148 aaKnown RBP8.46□□□□□ -1.06
TPM3-212ENST00000368533 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 OR4C46A6NHA9 309 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 PRTN3P24158 256 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 PAX2Q02962 417 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 WT1-ASQ06250 92 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 TMEM30BQ3MIR4 351 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 TMEM177Q53S58 311 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 C5orf17Q8NAS9 161 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 C18orf32Q8TCD1 76 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 SETD2Q9BYW2 2564 aaPredicted RBP8.45□□□□□ -1.06
TPM3-212ENST00000368533 ITPR3Q14573 2671 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 TRAV40A0A0B4J280 105 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 CGB1A6NKQ9 187 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 CNIH1O95406 144 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 C10orf113Q5VZT2 155 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 BLNKQ8WV28 456 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 SLC25A33Q9BSK2 321 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 GNB1LQ9BYB4 327 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 IGLC1P0CG04 106 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 USF1P22415 310 aaPredicted RBP8.45□□□□□ -1.06
TPM3-212ENST00000368533 SAA4P35542 130 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 SUB1P53999 127 aaKnown RBP eCLIP8.45□□□□□ -1.064e-7■□□□□ 9
TPM3-212ENST00000368533 UBE2G1P62253 170 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 VMA21Q3ZAQ7 101 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 KLF17Q5JT82 389 aaPredicted RBP8.45□□□□□ -1.06
TPM3-212ENST00000368533 FAM71F2Q6NXP2 309 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 C10orf105Q8TEF2 133 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 ZNF503Q96F45 646 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 TNFRSF19Q9NS68 423 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 ZNF355PQ9NSJ1 428 aa8.45□□□□□ -1.06
TPM3-212ENST00000368533 FBLL1A6NHQ2 334 aaKnown RBP8.44□□□□□ -1.06
TPM3-212ENST00000368533 C9JCJ5 164 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 MOSP00540 346 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 IBA57Q5T440 356 aaKnown RBP8.44□□□□□ -1.06
TPM3-212ENST00000368533 TMEM219Q86XT9 240 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 VSTM2AQ8TAG5 236 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 C11orf52Q96A22 123 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 PAXXQ9BUH6 204 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 NDUFA4L2Q9NRX3 87 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 MTORP42345 2549 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 C7orf71A4D174 169 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 G3V4G9 280 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 APCSP02743 223 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 OR10J3Q5JRS4 329 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 RAB37Q96AX2 223 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 SIRPDQ9H106 197 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 THYN1Q9P016 225 aa8.44□□□□□ -1.06
TPM3-212ENST00000368533 C2orf70A6NJV1 201 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 H3BTX0 84 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 MC5RP33032 325 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 CAMPP49913 170 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 MRGPRG-AS1Q2M3A8 158 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 OR4A5Q8NH83 315 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 AMMECR1Q9Y4X0 333 aaPredicted RBP8.43□□□□□ -1.06
TPM3-212ENST00000368533 FNDC10F2Z333 226 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 IGHV4-38-2P0DP08 117 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 ZNF137PP52743 207 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 CACNG8Q8WXS5 425 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 JMJD8Q96S16 334 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 MRPL36Q9P0J6 103 aaKnown RBP8.43□□□□□ -1.06
TPM3-212ENST00000368533 SIGLEC9Q9Y336 463 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 RNF223E7ERA6 249 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 LY6LH3BQJ8 138 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 PRB4P10163 310 aaPredicted RBP8.43□□□□□ -1.06
TPM3-212ENST00000368533 AZU1P20160 251 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 FOXA3P55318 350 aaPredicted RBP8.43□□□□□ -1.06
TPM3-212ENST00000368533 CX3CL1P78423 397 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 PPP1R27Q86WC6 154 aa8.43□□□□□ -1.06
TPM3-212ENST00000368533 UNC79Q9P2D8 2635 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 H3BUT2 72 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 M0R1W7 72 aa8.42□□□□□ -1.06
TPM3-212ENST00000368533 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
TPM3-212ENST00000368533 SLC25A34Q6PIV7 304 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms