RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 LINC01587Q99440 93 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 ARL6Q9H0F7 186 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 F5H768 121 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 ATP5G1P05496 136 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 METTL15P1P0C7V9 234 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 ATP5G3P48201 142 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 RRAS2P62070 204 aaPredicted RBP11.23□□□□□ -0.61
CKS1B-202ENST00000368436 BAK1Q16611 211 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 SPANXN2Q5MJ10 180 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 TEPPQ6URK8 271 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 ZNF575Q86XF7 245 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 ZNRF2Q8NHG8 242 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 ARV1Q9H2C2 271 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 FLVCR2Q9UPI3 526 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
CKS1B-202ENST00000368436 TSC22D2O75157 780 aa11.22□□□□□ -0.61
CKS1B-202ENST00000368436 CXCL2P19875 107 aa11.22□□□□□ -0.61
CKS1B-202ENST00000368436 TAS2R30P59541 319 aa11.22□□□□□ -0.61
CKS1B-202ENST00000368436 OR10P1Q8NGE3 313 aa11.22□□□□□ -0.61
CKS1B-202ENST00000368436 LRRC20Q8TCA0 184 aa11.22□□□□□ -0.61
CKS1B-202ENST00000368436 RPUSD4Q96CM3 377 aaKnown RBP11.22□□□□□ -0.61
CKS1B-202ENST00000368436 C16orf74Q96GX8 76 aa11.22□□□□□ -0.61
CKS1B-202ENST00000368436 RBM38Q9H0Z9 239 aaKnown RBP11.22□□□□□ -0.61
CKS1B-202ENST00000368436 PPP1R14DQ9NXH3 145 aa11.22□□□□□ -0.61
CKS1B-202ENST00000368436 RYR1P21817 5038 aa11.21□□□□□ -0.61
CKS1B-202ENST00000368436 NBDYA0A0U1RRE5 68 aa11.21□□□□□ -0.61
CKS1B-202ENST00000368436 CCDC160A6NGH7 325 aa11.21□□□□□ -0.61
CKS1B-202ENST00000368436 ANXA7P20073 488 aaKnown RBP11.21□□□□□ -0.61
CKS1B-202ENST00000368436 CDKN1BP46527 198 aa11.21□□□□□ -0.61
CKS1B-202ENST00000368436 SLC38A11Q08AI6 406 aa11.21□□□□□ -0.61
CKS1B-202ENST00000368436 IAH1Q2TAA2 248 aaPredicted RBP11.21□□□□□ -0.61
CKS1B-202ENST00000368436 ZNF493Q6ZR52 646 aa11.21□□□□□ -0.61
CKS1B-202ENST00000368436 ZNF331Q9NQX6 463 aaPredicted RBP11.21□□□□□ -0.61
CKS1B-202ENST00000368436 MGAT4CQ9UBM8 478 aa11.21□□□□□ -0.61
CKS1B-202ENST00000368436 NUDT3O95989 172 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 INPP1P49441 399 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 TNP2Q05952 138 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 ARL16Q0P5N6 197 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 C4orf46Q504U0 113 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 TRIQKQ629K1 86 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 LCN15Q6UWW0 184 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 ZNF546Q86UE3 836 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 ZBTB8BQ8NAP8 495 aaPredicted RBP11.2□□□□□ -0.62
CKS1B-202ENST00000368436 RNASE8Q8TDE3 154 aaKnown RBP11.2□□□□□ -0.62
CKS1B-202ENST00000368436 C20orf144Q9BQM9 153 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 GGACTQ9BVM4 153 aa11.2□□□□□ -0.62
CKS1B-202ENST00000368436 RCL1Q9Y2P8 373 aaKnown RBP11.2□□□□□ -0.62
CKS1B-202ENST00000368436 TIMM8BQ9Y5J9 83 aaPredicted RBP11.2□□□□□ -0.62
CKS1B-202ENST00000368436 GOSR2O14653 212 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 AGPAT2O15120 278 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 SCGB1D2O95969 90 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 PRB4P10163 310 aaPredicted RBP11.19□□□□□ -0.62
CKS1B-202ENST00000368436 HTN1P15515 57 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 BTCP35070 178 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 CCL18P55774 89 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 LINC00305Q7Z4B0 112 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 TMEM263Q8WUH6 116 aaKnown RBP11.19□□□□□ -0.62
CKS1B-202ENST00000368436 MITD1Q8WV92 249 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 RNF141Q8WVD5 230 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
CKS1B-202ENST00000368436 LINC00588Q9Y4M8 146 aa11.19□□□□□ -0.62
CKS1B-202ENST00000368436 C7orf66A4D0T2 115 aa11.18□□□□□ -0.62
CKS1B-202ENST00000368436 H7BYZ3 331 aa11.18□□□□□ -0.62
CKS1B-202ENST00000368436 ZNF701M0R085 212 aaPredicted RBP11.18□□□□□ -0.62
CKS1B-202ENST00000368436 BPIFA4PQ86YQ2 179 aa11.18□□□□□ -0.62
CKS1B-202ENST00000368436 C6orf223Q8N319 242 aa11.18□□□□□ -0.62
CKS1B-202ENST00000368436 LINC00612Q8N6U2 182 aa11.18□□□□□ -0.62
CKS1B-202ENST00000368436 TMEM37Q8WXS4 190 aa11.18□□□□□ -0.62
CKS1B-202ENST00000368436 NOP10Q9NPE3 64 aaKnown RBP11.18□□□□□ -0.62
CKS1B-202ENST00000368436 LINC00854A0A1B0GVQ3 168 aa11.17□□□□□ -0.62
CKS1B-202ENST00000368436 CENPXA8MT69 81 aa11.17□□□□□ -0.62
CKS1B-202ENST00000368436 PRAC2D3DTV9 90 aa11.17□□□□□ -0.62
CKS1B-202ENST00000368436 MBPP02686 304 aaPredicted RBP11.17□□□□□ -0.62
CKS1B-202ENST00000368436 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
CKS1B-202ENST00000368436 MORN5Q5VZ52 161 aa11.17□□□□□ -0.62
CKS1B-202ENST00000368436 MGST2Q99735 147 aa11.17□□□□□ -0.62
CKS1B-202ENST00000368436 KRTAP4-5Q9BYR2 181 aa11.17□□□□□ -0.62
CKS1B-202ENST00000368436 GSKIPQ9P0R6 139 aa11.17□□□□□ -0.62
CKS1B-202ENST00000368436 SNRPCP09234 159 aaKnown RBP11.16□□□□□ -0.62
CKS1B-202ENST00000368436 IGLC2P0DOY2 106 aa11.16□□□□□ -0.62
CKS1B-202ENST00000368436 CNPY1Q3B7I2 92 aa11.16□□□□□ -0.62
CKS1B-202ENST00000368436 SAT2Q96F10 170 aaPredicted RBP11.16□□□□□ -0.62
CKS1B-202ENST00000368436 ABCA13Q86UQ4 5058 aa11.16□□□□□ -0.62
CKS1B-202ENST00000368436 HSPG2P98160 4391 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 SLC17A3O00476 420 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 COX7A2P2O60397 106 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 OPCMLQ14982 345 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 C10orf113Q5VZT2 155 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 SSX7Q7RTT5 188 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 ZNF503Q96F45 646 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 PARD6GQ9BYG4 376 aaPredicted RBP11.15□□□□□ -0.62
CKS1B-202ENST00000368436 PXMP4Q9Y6I8 212 aa11.15□□□□□ -0.62
CKS1B-202ENST00000368436 H3BQ15 152 aa11.14□□□□□ -0.63
CKS1B-202ENST00000368436 H3BTX0 84 aa11.14□□□□□ -0.63
CKS1B-202ENST00000368436 IL7P13232 177 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms