RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 RNF114Q9Y508 228 aa13.58□□□□□ -0.24
NID1-202ENST00000366595 LYNX1G3V0Z9 82 aa13.58□□□□□ -0.24
NID1-202ENST00000366595 LYNX1P0DP58 116 aa13.58□□□□□ -0.24
NID1-202ENST00000366595 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
NID1-202ENST00000366595 ADCYAP1P18509 176 aa13.58□□□□□ -0.24
NID1-202ENST00000366595 IGKV1-27A0A075B6S5 117 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 NBL1P41271 181 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 CFHR1Q03591 330 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 TMEM243Q9BU79 118 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 PFN2P35080 140 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 C15orf53Q8NAA6 179 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 F8VRH5 84 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 AZU1P20160 251 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 SVILO95425 2214 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 A0A087WV48 116 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 H3BUX3 64 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 HERVK_113P63121 156 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 CRYBA4P53673 196 aa13.57□□□□□ -0.24
NID1-202ENST00000366595 LINC00473A8K010 186 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 IGHV2-70P01814 119 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 PRR31Q5SQ13 230 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 UBE2E2Q96LR5 201 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 TUBGCP6Q96RT7 1819 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 TMEM213A2RRL7 107 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 FGFBP3Q8TAT2 258 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 DEFB104AQ8WTQ1 72 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 SDHAF1A6NFY7 115 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 NPSP0C0P6 89 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 TMEM219Q86XT9 240 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 SPTA1P02549 2419 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 ZNF831Q5JPB2 1677 aa13.56□□□□□ -0.24
NID1-202ENST00000366595 CFHR2P36980 270 aa13.55□□□□□ -0.24
NID1-202ENST00000366595 Q6P435 159 aa13.55□□□□□ -0.24
NID1-202ENST00000366595 FOXG1P55316 489 aaPredicted RBP13.55□□□□□ -0.24
NID1-202ENST00000366595 LINC01545Q5VT33 79 aa13.55□□□□□ -0.24
NID1-202ENST00000366595 SPRR3Q9UBC9 169 aa13.55□□□□□ -0.24
NID1-202ENST00000366595 GAFA1Q96PS6 74 aa13.55□□□□□ -0.24
NID1-202ENST00000366595 MSRB2Q9Y3D2 182 aa13.55□□□□□ -0.24
NID1-202ENST00000366595 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
NID1-202ENST00000366595 DEFB130BP0DP73 79 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 DEFB130AP0DP74 79 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 KLRD1Q13241 179 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 C11orf44Q8N8P7 122 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 SMIM2Q9BVW6 85 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 HS3ST6Q96QI5 342 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 STRCP1A6NGW2 1772 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 hADV29S1A0JD25 119 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 MST1P26927 711 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 FAM110DQ8TAY7 271 aaPredicted RBP13.54□□□□□ -0.24
NID1-202ENST00000366595 SPTBP11277 2137 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 ESPL1Q14674 2120 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 IGLL1P15814 213 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 QRFPP83859 136 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 MRPL51Q4U2R6 128 aaKnown RBP13.54□□□□□ -0.24
NID1-202ENST00000366595 KLHL30-AS1Q8NEE0 82 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 C20orf78Q9BR46 151 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 C1orf43Q9BWL3 253 aa13.54□□□□□ -0.24
NID1-202ENST00000366595 J3QQQ9 107 aa13.53□□□□□ -0.24
NID1-202ENST00000366595 NPYP01303 97 aa13.53□□□□□ -0.24
NID1-202ENST00000366595 FAM186AA6NE01 2351 aa13.53□□□□□ -0.24
NID1-202ENST00000366595 IGHV1OR15-1A0A075B7D0 117 aa13.53□□□□□ -0.24
NID1-202ENST00000366595 K7EMI3 77 aa13.53□□□□□ -0.24
NID1-202ENST00000366595 DEFB131AP59861 70 aa13.53□□□□□ -0.24
NID1-202ENST00000366595 TRBV19A0A075B6N1 114 aa13.52□□□□□ -0.24
NID1-202ENST00000366595 Q6ZWC4 215 aa13.52□□□□□ -0.24
NID1-202ENST00000366595 SMIM27A0A1W2PRY6 76 aa13.52□□□□□ -0.24
NID1-202ENST00000366595 C5orf47Q569G3 176 aa13.52□□□□□ -0.24
NID1-202ENST00000366595 TRAV12-1A0A0B4J245 112 aa13.52□□□□□ -0.25
NID1-202ENST00000366595 MST1LQ2TV78 715 aa13.52□□□□□ -0.25
NID1-202ENST00000366595 GGNQ86UU5 652 aa13.52□□□□□ -0.25
NID1-202ENST00000366595 NTN5Q8WTR8 489 aaPredicted RBP13.52□□□□□ -0.25
NID1-202ENST00000366595 OVOL3O00110 214 aa13.52□□□□□ -0.25
NID1-202ENST00000366595 CSRP1P21291 193 aaKnown RBP13.52□□□□□ -0.25
NID1-202ENST00000366595 IGFL4Q6B9Z1 124 aa13.52□□□□□ -0.25
NID1-202ENST00000366595 TMEM14CQ9P0S9 112 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 TRPM3Q9HCF6 1732 aaPredicted RBP13.51□□□□□ -0.25
NID1-202ENST00000366595 SHISA9B4DS77 424 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 DKK1O94907 266 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 DAD1P61803 113 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 ORMDL1Q9P0S3 153 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 PKIGQ9Y2B9 76 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 H3BMG7 143 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 H3BQ85 93 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 LINC00479Q96M42 142 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 MRPL35Q9NZE8 188 aaKnown RBP13.51□□□□□ -0.25
NID1-202ENST00000366595 LTBP4Q8N2S1 1624 aa13.51□□□□□ -0.25
NID1-202ENST00000366595 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
NID1-202ENST00000366595 OTOFQ9HC10 1997 aa13.5□□□□□ -0.25
NID1-202ENST00000366595 ADAMTSL3P82987 1691 aa13.5□□□□□ -0.25
NID1-202ENST00000366595 PRB4P10163 310 aaPredicted RBP13.5□□□□□ -0.25
NID1-202ENST00000366595 LAMB2P55268 1798 aa13.5□□□□□ -0.25
NID1-202ENST00000366595 F6UB75 175 aa13.5□□□□□ -0.25
NID1-202ENST00000366595 CDKN1BP46527 198 aa13.5□□□□□ -0.25
NID1-202ENST00000366595 ZFP36L1Q07352 338 aaKnown RBP13.5□□□□□ -0.25
NID1-202ENST00000366595 PNRC2Q9NPJ4 139 aaKnown RBP13.5□□□□□ -0.25
NID1-202ENST00000366595 CFC1BP0CG36 223 aa13.5□□□□□ -0.25
NID1-202ENST00000366595 CFC1P0CG37 223 aa13.5□□□□□ -0.25
NID1-202ENST00000366595 C12orf74Q32Q52 190 aa13.5□□□□□ -0.25
NID1-202ENST00000366595 ATG2BQ96BY7 2078 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms