RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 PEX7O00628 323 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 CD28P10747 220 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 ATF4P18848 351 aaPredicted RBP17.68■□□□□ 0.42
SDF4-202ENST00000360001 HOXD3P31249 432 aaPredicted RBP17.68■□□□□ 0.42
SDF4-202ENST00000360001 RPL35P42766 123 aaKnown RBP17.68■□□□□ 0.42
SDF4-202ENST00000360001 GALR1P47211 349 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 GNG5P63218 68 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 DEFB136Q30KP8 78 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 C5orf17Q8NAS9 161 aa17.68■□□□□ 0.42
SDF4-202ENST00000360001 IGHV7-4-1A0A0J9YVY3 117 aa17.67■□□□□ 0.42
SDF4-202ENST00000360001 WFDC12Q8WWY7 111 aa17.67■□□□□ 0.42
SDF4-202ENST00000360001 RNF114Q9Y508 228 aa17.67■□□□□ 0.42
SDF4-202ENST00000360001 PNRC1Q12796 327 aaPredicted RBP17.66■□□□□ 0.42
SDF4-202ENST00000360001 REC114Q7Z4M0 266 aa17.66■□□□□ 0.42
SDF4-202ENST00000360001 KLHL30-AS1Q8NEE0 82 aa17.66■□□□□ 0.42
SDF4-202ENST00000360001 HIST1H2BAQ96A08 127 aa17.66■□□□□ 0.42
SDF4-202ENST00000360001 UFC1Q9Y3C8 167 aa17.66■□□□□ 0.42
SDF4-202ENST00000360001 C7orf77A4D0Y5 90 aa17.66■□□□□ 0.42
SDF4-202ENST00000360001 HAX1O00165 279 aa17.66■□□□□ 0.42
SDF4-202ENST00000360001 PROK1P58294 105 aa17.66■□□□□ 0.42
SDF4-202ENST00000360001 C11orf44Q8N8P7 122 aa17.66■□□□□ 0.42
SDF4-202ENST00000360001 HELTA6NFD8 242 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 ZNF785A8K8V0 405 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 ZNF253O75346 499 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 EDN2P20800 178 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 SYNJ2BPP57105 145 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 RHEBQ15382 184 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 LINC00479Q96M42 142 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 SMPXQ9UHP9 88 aa17.65■□□□□ 0.42
SDF4-202ENST00000360001 A0A1W2PS18 150 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 LGALS9O00182 355 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 AKR1C3P42330 323 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 RPL23P62829 140 aaKnown RBP17.64■□□□□ 0.41
SDF4-202ENST00000360001 TMEM213A2RRL7 107 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 A8MWP6 167 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 PSG9Q00887 426 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 OR11H1Q8NG94 326 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 GRAMD2BQ96HH9 432 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 ATG101Q9BSB4 218 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 RHPN1-AS1Q9BWJ2 59 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 C2CD3Q4AC94 2353 aa17.64■□□□□ 0.41
SDF4-202ENST00000360001 PGPEP1LA6NFU8 196 aa17.63■□□□□ 0.41
SDF4-202ENST00000360001 LINC01619G3V211 115 aa17.63■□□□□ 0.41
SDF4-202ENST00000360001 CHEK1O14757 476 aa17.63■□□□□ 0.41
SDF4-202ENST00000360001 TCRAP04437 139 aa17.63■□□□□ 0.41
SDF4-202ENST00000360001 KLF5Q13887 457 aaPredicted RBP17.63■□□□□ 0.41
SDF4-202ENST00000360001 ADIRFQ15847 76 aa17.63■□□□□ 0.41
SDF4-202ENST00000360001 RPS10P5Q9NQ39 176 aa17.63■□□□□ 0.41
SDF4-202ENST00000360001 RPH3ALQ9UNE2 315 aa17.63■□□□□ 0.41
SDF4-202ENST00000360001 C9JCJ5 164 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 SLURP1P55000 103 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 BTN1A1Q13410 526 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 C8orf86Q6ZUL3 223 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 LINC01551Q86U37 167 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 C1QL4Q86Z23 238 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 OR1N2Q8NGR9 330 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 CMTM2Q8TAZ6 248 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 CITED2Q99967 270 aaPredicted RBP17.62■□□□□ 0.41
SDF4-202ENST00000360001 AAMDCQ9H7C9 122 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 ZNF331Q9NQX6 463 aaPredicted RBP17.62■□□□□ 0.41
SDF4-202ENST00000360001 CNN1P51911 297 aaKnown RBP17.62■□□□□ 0.41
SDF4-202ENST00000360001 DUX3Q96PT4 197 aa17.62■□□□□ 0.41
SDF4-202ENST00000360001 M0R3E3 92 aa17.61■□□□□ 0.41
SDF4-202ENST00000360001 CENPWQ5EE01 88 aa17.61■□□□□ 0.41
SDF4-202ENST00000360001 NIPBLQ6KC79 2804 aaeCLIP17.61■□□□□ 0.415e-6■□□□□ 10
SDF4-202ENST00000360001 TRAV34A0A0B4J273 112 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 MEOX2P50222 304 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 DPF1Q92782 380 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 IGF2BP2-AS1Q96M15 143 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 AURKAIP1Q9NWT8 199 aaPredicted RBP17.6■□□□□ 0.41
SDF4-202ENST00000360001 KLF12Q9Y4X4 402 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 TSSC4Q9Y5U2 329 aaPredicted RBP17.6■□□□□ 0.41
SDF4-202ENST00000360001 B4DEV8 164 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 DNASE2O00115 360 aaPredicted RBP17.6■□□□□ 0.41
SDF4-202ENST00000360001 ISLRO14498 428 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 TAS2R60P59551 318 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 IGFL4Q6B9Z1 124 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 OCC1Q8TAD7 63 aa17.6■□□□□ 0.41
SDF4-202ENST00000360001 A0A1W2PRX2 142 aa17.59■□□□□ 0.41
SDF4-202ENST00000360001 GNG4P50150 75 aa17.59■□□□□ 0.41
SDF4-202ENST00000360001 TMEM183BQ1AE95 376 aa17.59■□□□□ 0.41
SDF4-202ENST00000360001 TMEM88Q6PEY1 159 aa17.59■□□□□ 0.41
SDF4-202ENST00000360001 CBLN2Q8IUK8 224 aa17.59■□□□□ 0.41
SDF4-202ENST00000360001 LY96Q9Y6Y9 160 aa17.59■□□□□ 0.41
SDF4-202ENST00000360001 HLA-DMBP28068 263 aa17.59■□□□□ 0.41
SDF4-202ENST00000360001 SLC50A1Q9BRV3 221 aa17.59■□□□□ 0.41
SDF4-202ENST00000360001 GOLT1AQ6ZVE7 132 aa17.58■□□□□ 0.4
SDF4-202ENST00000360001 RAX2Q96IS3 184 aa17.58■□□□□ 0.4
SDF4-202ENST00000360001 A0A087WWC5 75 aa17.57■□□□□ 0.4
SDF4-202ENST00000360001 DIRC3C9JPN6 131 aa17.57■□□□□ 0.4
SDF4-202ENST00000360001 K7EN84 100 aa17.57■□□□□ 0.4
SDF4-202ENST00000360001 IGLV2-8P01709 118 aa17.57■□□□□ 0.4
SDF4-202ENST00000360001 TRAV8-2A0A0B4J237 113 aa17.57■□□□□ 0.4
SDF4-202ENST00000360001 C2orf70A6NJV1 201 aa17.57■□□□□ 0.4
SDF4-202ENST00000360001 PRB4P10163 310 aaPredicted RBP17.57■□□□□ 0.4
SDF4-202ENST00000360001 ISOC2Q96AB3 205 aa17.57■□□□□ 0.4
SDF4-202ENST00000360001 SGK494Q96LW2 274 aa17.57■□□□□ 0.4
SDF4-202ENST00000360001 CBLN1P23435 193 aa17.56■□□□□ 0.4
SDF4-202ENST00000360001 BMI1P35226 326 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms