RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 ZNF320A2RRD8 509 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 H3BTX0 84 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 NDUFA4O00483 81 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 METTL26Q96S19 204 aa13.8□□□□□ -0.2
CDK11A-202ENST00000356937 A0A087WWC5 75 aa13.79□□□□□ -0.2
CDK11A-202ENST00000356937 NDUFA6P56556 154 aa13.79□□□□□ -0.2
CDK11A-202ENST00000356937 BPIFA4PQ86YQ2 179 aa13.79□□□□□ -0.2
CDK11A-202ENST00000356937 IGHV3-66A0A0C4DH42 116 aa13.79□□□□□ -0.2
CDK11A-202ENST00000356937 NBEAP1P0C6P0 100 aa13.79□□□□□ -0.2
CDK11A-202ENST00000356937 C2CD3Q4AC94 2353 aa13.79□□□□□ -0.2
CDK11A-202ENST00000356937 TEP1Q99973 2627 aaKnown RBP13.78□□□□□ -0.2
CDK11A-202ENST00000356937 APOHP02749 345 aaPredicted RBP13.78□□□□□ -0.2
CDK11A-202ENST00000356937 NPPCP23582 126 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 DDTP30046 118 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 RPEL1Q2QD12 228 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 OR8I2Q8N0Y5 310 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 TMEM14CQ9P0S9 112 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 CXorf65A6NEN9 183 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 TSTD3H0UI37 97 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 NDUFA7O95182 113 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 S100A7P31151 101 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 RAB4BP61018 213 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 SOHLH1Q5JUK2 328 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 CDPF1Q6NVV7 123 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 WIPF2Q8TF74 440 aaPredicted RBP13.78□□□□□ -0.2
CDK11A-202ENST00000356937 C2orf88Q9BSF0 95 aa13.78□□□□□ -0.2
CDK11A-202ENST00000356937 JMJD1CQ15652 2540 aa13.77□□□□□ -0.21
CDK11A-202ENST00000356937 IGHV4OR15-8A0A075B7B6 117 aa13.77□□□□□ -0.21
CDK11A-202ENST00000356937 A0A087WW49 117 aa13.77□□□□□ -0.21
CDK11A-202ENST00000356937 H3BQ15 152 aa13.77□□□□□ -0.21
CDK11A-202ENST00000356937 DEFB136Q30KP8 78 aa13.77□□□□□ -0.21
CDK11A-202ENST00000356937 OR4F17Q8NGA8 305 aa13.77□□□□□ -0.21
CDK11A-202ENST00000356937 OR10D4PQ8NGN7 298 aa13.77□□□□□ -0.21
CDK11A-202ENST00000356937 RNF114Q9Y508 228 aa13.77□□□□□ -0.21
CDK11A-202ENST00000356937 CD28P10747 220 aa13.76□□□□□ -0.21
CDK11A-202ENST00000356937 RANP62826 216 aaKnown RBP13.76□□□□□ -0.21
CDK11A-202ENST00000356937 FAM106AQ4KMX7 169 aa13.76□□□□□ -0.21
CDK11A-202ENST00000356937 ZNF586Q9NXT0 402 aa13.76□□□□□ -0.21
CDK11A-202ENST00000356937 PPP1R2P9O14990 202 aa13.76□□□□□ -0.21
CDK11A-202ENST00000356937 BUB3O43684 328 aa13.76□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H1EP10412 219 aaKnown RBP13.76□□□□□ -0.21
CDK11A-202ENST00000356937 CRYBB3P26998 211 aa13.76□□□□□ -0.21
CDK11A-202ENST00000356937 SUMO1P63165 101 aaKnown RBP13.76□□□□□ -0.21
CDK11A-202ENST00000356937 TMEM190Q8WZ59 177 aa13.76□□□□□ -0.21
CDK11A-202ENST00000356937 A0A1W2PRE2 83 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 GGTLC3B5MD39 225 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 MRPS12O15235 138 aaKnown RBP13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST3H2BBQ8N257 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 KLHL30-AS1Q8NEE0 82 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 C17orf77Q96MU5 243 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 ARL2-SNX15V9GYD0 113 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 PDE6DO43924 150 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BKO60814 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BJP06899 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 RPL7P18124 248 aaKnown RBP13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BOP23527 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BBP33778 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BDP58876 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BCP62807 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST2H2BEQ16778 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.75□□□□□ -0.21
CDK11A-202ENST00000356937 GPHB5Q86YW7 130 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BHQ93079 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 RPUSD4Q96CM3 377 aaKnown RBP13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BNQ99877 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 HIST1H2BMQ99879 126 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 TXNDC17Q9BRA2 123 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 RNF24Q9Y225 148 aa13.75□□□□□ -0.21
CDK11A-202ENST00000356937 A0A1W2PRX2 142 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 IGLC2P0DOY2 106 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 ELOBQ15370 118 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 ZNF674Q2M3X9 581 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 TM4SF20Q53R12 229 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 FAM90A2PQ658T7 463 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 C4orf3Q8WVX3 66 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 SCO2A0A1W2PP80 73 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 TMEM250H0YL14 139 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 DUX3Q96PT4 197 aa13.74□□□□□ -0.21
CDK11A-202ENST00000356937 HOXD3P31249 432 aaPredicted RBP13.73□□□□□ -0.21
CDK11A-202ENST00000356937 U3KQE9 123 aa13.73□□□□□ -0.21
CDK11A-202ENST00000356937 TRBV19A0A075B6N1 114 aa13.73□□□□□ -0.21
CDK11A-202ENST00000356937 F6UZH7 168 aa13.73□□□□□ -0.21
CDK11A-202ENST00000356937 NDUFB4O95168 129 aa13.73□□□□□ -0.21
CDK11A-202ENST00000356937 OR11H1Q8NG94 326 aa13.73□□□□□ -0.21
CDK11A-202ENST00000356937 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
CDK11A-202ENST00000356937 DAZ1Q9NQZ3 744 aaKnown RBP13.73□□□□□ -0.21
CDK11A-202ENST00000356937 SMAD5-AS1Q9Y6J3 95 aa13.73□□□□□ -0.21
CDK11A-202ENST00000356937 PGPA6NDG6 321 aa13.72□□□□□ -0.21
CDK11A-202ENST00000356937 MAST4O15021 2626 aa13.72□□□□□ -0.21
CDK11A-202ENST00000356937 SYNJ2BPP57105 145 aa13.72□□□□□ -0.21
CDK11A-202ENST00000356937 PROK1P58294 105 aa13.72□□□□□ -0.21
CDK11A-202ENST00000356937 C8orf86Q6ZUL3 223 aa13.72□□□□□ -0.21
CDK11A-202ENST00000356937 NEU1Q99519 415 aa13.72□□□□□ -0.21
CDK11A-202ENST00000356937 ELOVL1Q9BW60 279 aa13.72□□□□□ -0.21
CDK11A-202ENST00000356937 Q9H3A6 140 aa13.72□□□□□ -0.21
CDK11A-202ENST00000356937 SLC17A3O00476 420 aa13.71□□□□□ -0.21
CDK11A-202ENST00000356937 C1orf194Q5T5A4 169 aa13.71□□□□□ -0.21
CDK11A-202ENST00000356937 DPF1Q92782 380 aa13.71□□□□□ -0.21
CDK11A-202ENST00000356937 DERL1Q9BUN8 251 aa13.71□□□□□ -0.21
CDK11A-202ENST00000356937 GPR61Q9BZJ8 451 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms