RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 SPXQ9BT56 116 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 CSTL1Q9H114 145 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 SIVA1O15304 175 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 ZNF837Q96EG3 531 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 BRWD3Q6RI45 1802 aa9.47□□□□□ -0.89
SPTBN1-202ENST00000356805 TRBV6-6A0A0A6YYG2 114 aa9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 TAL2Q16559 108 aa9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 NUP35Q8NFH5 326 aa9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 GAGE12HA6NDE8 117 aa9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 CMC4P56277 68 aaPredicted RBP9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 CSRP2Q16527 193 aa9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 CACNA1HO95180 2353 aa9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 IGKV1D-13A0A0B4J2D9 117 aa9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 IGKV1-13P0DP09 117 aa9.46□□□□□ -0.89
SPTBN1-202ENST00000356805 ARHGAP21Q5T5U3 1957 aa9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 PFN1P07737 140 aaKnown RBP9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 NPSP0C0P6 89 aa9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 GREB1LQ9C091 1923 aaPredicted RBP9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 TRAV25A0A0B4J276 109 aa9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 SLAQ13239 276 aa9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 LOC102723996A0A087X1L8 192 aa9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 DUTP33316 252 aaKnown RBP9.46□□□□□ -0.9
SPTBN1-202ENST00000356805 COL11A2P13942 1736 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 hDV102S1A0JD36 115 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 A0A087WWL8 130 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 H3BMM0 161 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 SPSB3Q6PJ21 355 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 UBE2WQ96B02 151 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 ZNF319Q9P2F9 582 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 GAGE12JA6NER3 117 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 GAGE7O76087 117 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 CLPSP04118 112 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 GAGE12FP0CL80 117 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 GAGE12GP0CL81 117 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 GAGE12IP0CL82 117 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 YPEL3P61236 119 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 GAGE4Q13068 117 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 LCN12Q6JVE5 192 aa9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.45□□□□□ -0.9
SPTBN1-202ENST00000356805 IGKV1-9A0A0C4DH69 117 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 UTF1Q5T230 341 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 IGHV2-26A0A0B4J1V2 119 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 TRGV9Q99603 122 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 BRD3OSQ6XYD6 125 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 RPUSD1Q9UJJ7 312 aaKnown RBP9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 IGLV3-32A0A0A0MS00 114 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 TRBV7-1A0A0A6YYK4 115 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 SPATA31B1PQ5VZV4 182 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 PRIMA1Q86XR5 153 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 PIP4P2Q8N4L2 257 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 COX8AP10176 69 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 TIMM21Q9BVV7 248 aa9.44□□□□□ -0.9
SPTBN1-202ENST00000356805 CLPSL1A2RUU4 121 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 TICRRQ7Z2Z1 1910 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 C14orf178Q8N769 122 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 SPRR3Q9UBC9 169 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 F5H768 121 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 GAGE5Q13069 117 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 GAGE6Q13070 117 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 MST1LQ2TV78 715 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 LYZL1Q6UWQ5 148 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 IGHV1-18A0A0C4DH31 117 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 VCYO14598 125 aa9.43□□□□□ -0.9
SPTBN1-202ENST00000356805 Q8TAT8 98 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 KLHDC3Q9BQ90 382 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 VSIRQ9H7M9 311 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 TSSC4Q9Y5U2 329 aaPredicted RBP9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 SH2D1AO60880 128 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 PDE6HQ13956 83 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 A0A1W2PPM0 123 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 MYMXA0A1B0GTQ4 84 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 SMKR1H3BMG3 65 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 COL5A3P25940 1745 aaPredicted RBP9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 SCN10AQ9Y5Y9 1956 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 LYPD3O95274 346 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 TMEM200BQ69YZ2 307 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 ZNF329Q86UD4 541 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 A0A0A6YYD4 124 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 H3BUX3 64 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 HAPLN4Q86UW8 402 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 WBP1Q96G27 269 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 ZNF492Q9P255 531 aa9.42□□□□□ -0.9
SPTBN1-202ENST00000356805 PCNX1Q96RV3 2341 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 KIR2DL5BA0A0G2JN68 375 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 KIR2DL5BA0A0G2JPC4 375 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 KIR2DL5AQ8N109 375 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 C18orf32Q8TCD1 76 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 IGFL4Q6B9Z1 124 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 C9JAW5 83 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 TGFBR3LH3BV60 316 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 ZNF138P52744 262 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 DSCR9P59020 149 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 OR11H6Q8NGC7 330 aa9.41□□□□□ -0.9
SPTBN1-202ENST00000356805 MSRB2Q9Y3D2 182 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms