RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 TLN2Q9Y4G6 2542 aa19.81■□□□□ 0.76
CLK2-201ENST00000355560 LTAP01374 205 aa19.81■□□□□ 0.76
CLK2-201ENST00000355560 SNRPEP62304 92 aaKnown RBP19.81■□□□□ 0.76
CLK2-201ENST00000355560 SMAD5-AS1Q9Y6J3 95 aa19.81■□□□□ 0.76
CLK2-201ENST00000355560 M0R3E3 92 aa19.8■□□□□ 0.76
CLK2-201ENST00000355560 TYMSP04818 313 aa19.8■□□□□ 0.76
CLK2-201ENST00000355560 PRR27Q6MZM9 219 aa19.8■□□□□ 0.76
CLK2-201ENST00000355560 PRDM13Q9H4Q3 707 aa19.8■□□□□ 0.76
CLK2-201ENST00000355560 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP19.79■□□□□ 0.76
CLK2-201ENST00000355560 ZNF207O43670 478 aaKnown RBP19.79■□□□□ 0.76
CLK2-201ENST00000355560 RPEL1Q2QD12 228 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 BTF3L4Q96K17 158 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 FLNAP21333 2647 aaKnown RBP19.79■□□□□ 0.76
CLK2-201ENST00000355560 UNC79Q9P2D8 2635 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 IGHV3-66A0A0C4DH42 116 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 A0A0G2JLM5 398 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 ZNF320A2RRD8 509 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 PSG9Q00887 426 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 IL17RELQ6ZVW7 336 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 Q86TA4 180 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 SERTAD4Q9NUC0 356 aa19.79■□□□□ 0.76
CLK2-201ENST00000355560 GCN1Q92616 2671 aaKnown RBP19.78■□□□□ 0.76
CLK2-201ENST00000355560 IGHV3OR16-13A0A075B7E8 117 aa19.78■□□□□ 0.76
CLK2-201ENST00000355560 IGHV3-74A0A0B4J1X5 117 aa19.78■□□□□ 0.76
CLK2-201ENST00000355560 IGLV2-11P01706 119 aa19.78■□□□□ 0.76
CLK2-201ENST00000355560 OR4X2Q8NGF9 303 aa19.78■□□□□ 0.76
CLK2-201ENST00000355560 MLST8Q9BVC4 326 aa19.78■□□□□ 0.76
CLK2-201ENST00000355560 ITPR2Q14571 2701 aa19.78■□□□□ 0.76
CLK2-201ENST00000355560 ZNF705GA8MUZ8 300 aaPredicted RBP19.78■□□□□ 0.76
CLK2-201ENST00000355560 APOHP02749 345 aaPredicted RBP19.78■□□□□ 0.76
CLK2-201ENST00000355560 PRB4P10163 310 aaPredicted RBP19.78■□□□□ 0.76
CLK2-201ENST00000355560 FRZBQ92765 325 aa19.78■□□□□ 0.76
CLK2-201ENST00000355560 IGHV3-49A0A0A0MS15 119 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 C5orf52A6NGY3 159 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BKO60814 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BJP06899 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BOP23527 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BBP33778 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BDP58876 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BCP62807 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST2H2BEQ16778 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST2H2BFQ5QNW6 126 aaPredicted RBP19.77■□□□□ 0.76
CLK2-201ENST00000355560 FAM231DQ6ZW35 169 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BHQ93079 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BNQ99877 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 HIST1H2BMQ99879 126 aa19.77■□□□□ 0.76
CLK2-201ENST00000355560 DIRC3C9JPN6 131 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 K7EQM0 130 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 PHOX2AO14813 284 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 IGHG4P01861 327 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 FOXC2Q99958 501 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 PRSS22Q9GZN4 317 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 PSMB8P28062 276 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 PRNTQ86SH4 94 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 TMEM75Q8N9X5 138 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 NPFFR1Q9GZQ6 430 aa19.76■□□□□ 0.75
CLK2-201ENST00000355560 ZNF253O75346 499 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 C1orf194Q5T5A4 169 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 TRAV9-1A0A075B6T8 112 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 ZNF785A8K8V0 405 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 NDUFA4O00483 81 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 TRGC1P0CF51 173 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 C10orf99Q6UWK7 81 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 UNQ9165/PRO28630Q6UXU0 137 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 NUDT10Q8NFP7 164 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 NUDT11Q96G61 164 aa19.75■□□□□ 0.75
CLK2-201ENST00000355560 CA1P00915 261 aaPredicted RBP19.74■□□□□ 0.75
CLK2-201ENST00000355560 CSN1S1P47710 185 aa19.74■□□□□ 0.75
CLK2-201ENST00000355560 SIGLECL1Q8N7X8 197 aa19.74■□□□□ 0.75
CLK2-201ENST00000355560 DUX5Q96PT3 197 aa19.74■□□□□ 0.75
CLK2-201ENST00000355560 ZNF702PQ9H963 129 aa19.74■□□□□ 0.75
CLK2-201ENST00000355560 U3KQE9 123 aa19.74■□□□□ 0.75
CLK2-201ENST00000355560 A0A087X0K7 114 aa19.73■□□□□ 0.75
CLK2-201ENST00000355560 TMEM183AQ8IXX5 376 aa19.73■□□□□ 0.75
CLK2-201ENST00000355560 TCL1AP56279 114 aa19.73■□□□□ 0.75
CLK2-201ENST00000355560 PSG3Q16557 428 aa19.73■□□□□ 0.75
CLK2-201ENST00000355560 TEX29Q8N6K0 151 aa19.73■□□□□ 0.75
CLK2-201ENST00000355560 ZNF331Q9NQX6 463 aaPredicted RBP19.73■□□□□ 0.75
CLK2-201ENST00000355560 TRBV6-1A0A0K0K1D8 114 aa19.72■□□□□ 0.75
CLK2-201ENST00000355560 GATCO43716 136 aaKnown RBP19.72■□□□□ 0.75
CLK2-201ENST00000355560 FABP9Q0Z7S8 132 aa19.72■□□□□ 0.75
CLK2-201ENST00000355560 ACTL10Q5JWF8 245 aa19.72■□□□□ 0.75
CLK2-201ENST00000355560 IGFL4Q6B9Z1 124 aa19.72■□□□□ 0.75
CLK2-201ENST00000355560 FAM209BQ5JX69 171 aa19.72■□□□□ 0.75
CLK2-201ENST00000355560 LINC00322Q6ZN03 302 aaPredicted RBP19.72■□□□□ 0.75
CLK2-201ENST00000355560 Q71RC1 249 aaPredicted RBP19.71■□□□□ 0.75
CLK2-201ENST00000355560 PSG8Q9UQ74 426 aa19.71■□□□□ 0.75
CLK2-201ENST00000355560 SONP18583 2426 aaKnown RBP19.71■□□□□ 0.75
CLK2-201ENST00000355560 SMIM27A0A1W2PRY6 76 aa19.7■□□□□ 0.74
CLK2-201ENST00000355560 UBE2CO00762 179 aa19.7■□□□□ 0.74
CLK2-201ENST00000355560 NDUFA6P56556 154 aa19.7■□□□□ 0.74
CLK2-201ENST00000355560 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.7■□□□□ 0.74
CLK2-201ENST00000355560 HLA-DMBP28068 263 aa19.7■□□□□ 0.74
CLK2-201ENST00000355560 SERTM2A0A1B0GWG4 89 aa19.69■□□□□ 0.74
CLK2-201ENST00000355560 TMEM89A2RUT3 159 aa19.69■□□□□ 0.74
CLK2-201ENST00000355560 ASCL2Q99929 193 aa19.69■□□□□ 0.74
CLK2-201ENST00000355560 AKR1D1P51857 326 aa19.69■□□□□ 0.74
CLK2-201ENST00000355560 GRAMD2BQ96HH9 432 aa19.69■□□□□ 0.74
CLK2-201ENST00000355560 ZNF492Q9P255 531 aa19.69■□□□□ 0.74
CLK2-201ENST00000355560 PEF1Q9UBV8 284 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms