RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 IGHV1-69P01742 117 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 SS18Q15532 418 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 ZNF562Q6V9R5 426 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 LAMTOR3Q9UHA4 124 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 NDUFAF3Q9BU61 184 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 MS4A6AQ9H2W1 248 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 LINC01619G3V211 115 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 HIST1H2BLQ99880 126 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 XCL2Q9UBD3 114 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 A0A1W2PPI3 338 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 SHANK2-AS3Q9BTD1 123 aa14.59□□□□□ -0.07
COL18A1-202ENST00000355480 SPAG8Q99932 426 aaPredicted RBP14.58□□□□□ -0.07
COL18A1-202ENST00000355480 F8WEM9 126 aa14.58□□□□□ -0.08
COL18A1-202ENST00000355480 INS-IGF2F8WCM5 200 aa14.58□□□□□ -0.08
COL18A1-202ENST00000355480 Q6ZS49 121 aa14.58□□□□□ -0.08
COL18A1-202ENST00000355480 A0A0G2JRQ6 117 aa14.58□□□□□ -0.08
COL18A1-202ENST00000355480 FAM110DQ8TAY7 271 aaPredicted RBP14.57□□□□□ -0.08
COL18A1-202ENST00000355480 TMEM158Q8WZ71 300 aa14.57□□□□□ -0.08
COL18A1-202ENST00000355480 SMKR1H3BMG3 65 aa14.57□□□□□ -0.08
COL18A1-202ENST00000355480 A0A1B0GW64 132 aa14.57□□□□□ -0.08
COL18A1-202ENST00000355480 SAMD5Q5TGI4 173 aa14.57□□□□□ -0.08
COL18A1-202ENST00000355480 IL17RELQ6ZVW7 336 aa14.57□□□□□ -0.08
COL18A1-202ENST00000355480 J3QKU1 62 aa14.57□□□□□ -0.08
COL18A1-202ENST00000355480 Q71RC1 249 aaPredicted RBP14.57□□□□□ -0.08
COL18A1-202ENST00000355480 LIME1Q9H400 295 aa14.57□□□□□ -0.08
COL18A1-202ENST00000355480 ABCA4P78363 2273 aa14.57□□□□□ -0.08
COL18A1-202ENST00000355480 DKK1O94907 266 aa14.56□□□□□ -0.08
COL18A1-202ENST00000355480 CR1LQ2VPA4 569 aa14.56□□□□□ -0.08
COL18A1-202ENST00000355480 LY96Q9Y6Y9 160 aa14.56□□□□□ -0.08
COL18A1-202ENST00000355480 Q86TA4 180 aa14.56□□□□□ -0.08
COL18A1-202ENST00000355480 F5H768 121 aa14.56□□□□□ -0.08
COL18A1-202ENST00000355480 KNCNA6PVL3 124 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 AMN1Q8IY45 258 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 HS3ST6Q96QI5 342 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 SPOCK3Q9BQ16 436 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 ARMS2P0C7Q2 107 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 CFHR3Q02985 330 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 GATA4P43694 442 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 IGHV2-70DA0A0C4DH43 119 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 DAD1P61803 113 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 Q6ZRM9 215 aa14.55□□□□□ -0.08
COL18A1-202ENST00000355480 GUSBP1Q15486 140 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 G3V318 75 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 SSBP2P81877 361 aaPredicted RBP14.54□□□□□ -0.08
COL18A1-202ENST00000355480 PRIMA1Q86XR5 153 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 FNDC10F2Z333 226 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 ITGB1BP1O14713 200 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 NDUFB8O95169 186 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 PDE6HQ13956 83 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 GAGE13Q4V321 117 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 BCL6BQ8N143 479 aaPredicted RBP14.54□□□□□ -0.08
COL18A1-202ENST00000355480 FER1L5A0AVI2 2057 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 MYMXA0A1B0GTQ4 84 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 AMBPP02760 352 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 SPINK13Q1W4C9 94 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 IGFL3Q6UXB1 125 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 SPXQ9BT56 116 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 LEPROTO15243 131 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 HIST3H2BBQ8N257 126 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 TIMM21Q9BVV7 248 aa14.54□□□□□ -0.08
COL18A1-202ENST00000355480 LY6G5BQ8NDX9 201 aa14.53□□□□□ -0.08
COL18A1-202ENST00000355480 UBE2CO00762 179 aa14.53□□□□□ -0.08
COL18A1-202ENST00000355480 ROS1P08922 2347 aa14.53□□□□□ -0.08
COL18A1-202ENST00000355480 Q8TCH9 128 aa14.53□□□□□ -0.08
COL18A1-202ENST00000355480 ABCA1O95477 2261 aa14.53□□□□□ -0.08
COL18A1-202ENST00000355480 MPDZO75970 2070 aa14.53□□□□□ -0.08
COL18A1-202ENST00000355480 DIDO1Q9BTC0 2240 aaKnown RBP14.53□□□□□ -0.08
COL18A1-202ENST00000355480 CADP27708 2225 aa14.52□□□□□ -0.08
COL18A1-202ENST00000355480 GAGE12JA6NER3 117 aa14.52□□□□□ -0.08
COL18A1-202ENST00000355480 GAGE1Q13065 139 aa14.52□□□□□ -0.08
COL18A1-202ENST00000355480 GAGE4Q13068 117 aa14.52□□□□□ -0.08
COL18A1-202ENST00000355480 GAGE5Q13069 117 aa14.52□□□□□ -0.08
COL18A1-202ENST00000355480 TRPT1Q86TN4 253 aaKnown RBP14.52□□□□□ -0.08
COL18A1-202ENST00000355480 hDV102S1A0JD36 115 aa14.52□□□□□ -0.09
COL18A1-202ENST00000355480 CFHR2P36980 270 aa14.52□□□□□ -0.09
COL18A1-202ENST00000355480 LINC00479Q96M42 142 aa14.52□□□□□ -0.09
COL18A1-202ENST00000355480 HEATR1Q9H583 2144 aaKnown RBP14.52□□□□□ -0.09
COL18A1-202ENST00000355480 FAM90A2PQ658T7 463 aa14.51□□□□□ -0.09
COL18A1-202ENST00000355480 C1orf122Q6ZSJ8 110 aa14.51□□□□□ -0.09
COL18A1-202ENST00000355480 LGALS1P09382 135 aaKnown RBP14.51□□□□□ -0.09
COL18A1-202ENST00000355480 NAA38Q9BRA0 125 aaKnown RBP14.51□□□□□ -0.09
COL18A1-202ENST00000355480 KLK9Q9UKQ9 250 aa14.51□□□□□ -0.09
COL18A1-202ENST00000355480 COLCA2A8K830 154 aa14.51□□□□□ -0.09
COL18A1-202ENST00000355480 IGHV3-16A0A0C4DH30 117 aa14.51□□□□□ -0.09
COL18A1-202ENST00000355480 TMEM256Q8N2U0 113 aa14.5□□□□□ -0.09
COL18A1-202ENST00000355480 LRRK1Q38SD2 2015 aa14.5□□□□□ -0.09
COL18A1-202ENST00000355480 LOC105371267A0A1B0GV96 52 aa14.5□□□□□ -0.09
COL18A1-202ENST00000355480 CEACAM8P31997 349 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-202ENST00000355480 YPEL3P61236 119 aaPredicted RBP14.5□□□□□ -0.09
COL18A1-202ENST00000355480 HIST1H4AP62805 103 aaKnown RBP14.5□□□□□ -0.09
COL18A1-202ENST00000355480 MST1LQ2TV78 715 aa14.5□□□□□ -0.09
COL18A1-202ENST00000355480 LY6G6EA0A0G2JKS1 128 aa14.49□□□□□ -0.09
COL18A1-202ENST00000355480 Q6ZR03 302 aa14.49□□□□□ -0.09
COL18A1-202ENST00000355480 U3KQA8 63 aa14.49□□□□□ -0.09
COL18A1-202ENST00000355480 IGKV1-6A0A0C4DH72 117 aa14.49□□□□□ -0.09
COL18A1-202ENST00000355480 ZNF561-AS1K7EIQ3 104 aa14.49□□□□□ -0.09
COL18A1-202ENST00000355480 RHODO00212 210 aa14.49□□□□□ -0.09
COL18A1-202ENST00000355480 SRSF4Q08170 494 aaKnown RBP14.49□□□□□ -0.09
COL18A1-202ENST00000355480 ZC2HC1BQ5TFG8 222 aa14.49□□□□□ -0.09
COL18A1-202ENST00000355480 DUX4L9Q6RFH8 374 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms