RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 FAM78BQ5VT40 261 aa11.64□□□□□ -0.55
ATG4B-201ENST00000344376 LRRC20Q8TCA0 184 aa11.64□□□□□ -0.55
ATG4B-201ENST00000344376 ELOA3CA0A087WX78 387 aaPredicted RBP11.63□□□□□ -0.55
ATG4B-201ENST00000344376 A0A087X0K7 114 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 LINC00862A6NCI5 91 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 F6UB75 175 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 RLN2P04090 185 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 FXYD7P58549 80 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 TEX261Q6UWH6 196 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 PATE2Q6UY27 113 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 Q6ZRG5 221 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 TMEM252Q8N6L7 170 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 LINC00476Q8WZB0 136 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 C17orf77Q96MU5 243 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 NMES1Q9C002 83 aa11.63□□□□□ -0.55
ATG4B-201ENST00000344376 UBE2L5PA0A1B0GUS4 154 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 C11orf94C9JXX5 98 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 DUSP14O95147 198 aaKnown RBP11.62□□□□□ -0.55
ATG4B-201ENST00000344376 IFNA7P01567 189 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 BAXQ07812 192 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 ZNF345Q14585 488 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 C10orf113Q5VZT2 155 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 ZNF709Q8N972 641 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 ZNF738Q8NE65 137 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 WDR83OSQ9Y284 106 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 TRAV8-2A0A0B4J237 113 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 LY6G6CO95867 125 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 OPCMLQ14982 345 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 ATP6V1FQ16864 119 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 VWC2Q2TAL6 325 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 ZNF705AQ6ZN79 300 aaPredicted RBP11.62□□□□□ -0.55
ATG4B-201ENST00000344376 BPIFA4PQ86YQ2 179 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 OR1L4Q8NGR5 311 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 NEU1Q99519 415 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 SLC35B3Q9H1N7 401 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 GOLT1BQ9Y3E0 138 aa11.62□□□□□ -0.55
ATG4B-201ENST00000344376 ALMS1Q8TCU4 4167 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 A0A0D9SG52 128 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 SMIM9A6NGZ8 99 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 CXCL2P19875 107 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 IGFL4Q6B9Z1 124 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 LCN15Q6UWW0 184 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 RNF182Q8N6D2 247 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 ZNF680Q8NEM1 530 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 PFDN5Q99471 154 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 SLC25A31Q9H0C2 315 aa11.61□□□□□ -0.55
ATG4B-201ENST00000344376 FXYD6-FXYD2A0A087WZ82 144 aa11.6□□□□□ -0.55
ATG4B-201ENST00000344376 TMEM189A5PLL7 270 aa11.6□□□□□ -0.55
ATG4B-201ENST00000344376 ZNF705FA8MVS1 300 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-201ENST00000344376 E5RGE8 158 aa11.6□□□□□ -0.55
ATG4B-201ENST00000344376 ARPC5O15511 151 aa11.6□□□□□ -0.55
ATG4B-201ENST00000344376 AMBPP02760 352 aa11.6□□□□□ -0.55
ATG4B-201ENST00000344376 ZNF705DP0CH99 300 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-201ENST00000344376 ZNF705BP0CI00 300 aaPredicted RBP11.6□□□□□ -0.55
ATG4B-201ENST00000344376 HLA-DMBP28068 263 aa11.6□□□□□ -0.55
ATG4B-201ENST00000344376 MIC13Q5XKP0 118 aa11.6□□□□□ -0.55
ATG4B-201ENST00000344376 DNAJC4Q9NNZ3 241 aa11.6□□□□□ -0.55
ATG4B-201ENST00000344376 A8MTW9 85 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 FGF7P21781 194 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 CNN1P51911 297 aaKnown RBP11.59□□□□□ -0.55
ATG4B-201ENST00000344376 B2MP61769 119 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 PRR20EP86478 221 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 PRR20CP86479 221 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 PRR20DP86480 221 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 PRR20BP86481 221 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 PRR20AP86496 221 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 LRRC37A5PQ49AS3 106 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 PPP1R1CQ8WVI7 109 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 TMEM37Q8WXS4 190 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 RFNGQ9Y644 331 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 PLECQ15149 4684 aaKnown RBP11.59□□□□□ -0.55
ATG4B-201ENST00000344376 DNAH1Q9P2D7 4330 aa11.59□□□□□ -0.55
ATG4B-201ENST00000344376 MPDU1O75352 247 aa11.58□□□□□ -0.55
ATG4B-201ENST00000344376 PET100P0DJ07 73 aa11.58□□□□□ -0.55
ATG4B-201ENST00000344376 RPL29P47914 159 aaKnown RBP11.58□□□□□ -0.55
ATG4B-201ENST00000344376 TCTAP57738 103 aa11.58□□□□□ -0.55
ATG4B-201ENST00000344376 PSG3Q16557 428 aa11.58□□□□□ -0.55
ATG4B-201ENST00000344376 TMUB2Q71RG4 321 aa11.58□□□□□ -0.55
ATG4B-201ENST00000344376 THAP6Q8TBB0 222 aa11.58□□□□□ -0.55
ATG4B-201ENST00000344376 SLC39A9Q9NUM3 307 aa11.58□□□□□ -0.55
ATG4B-201ENST00000344376 TNFSF18Q9UNG2 199 aa11.58□□□□□ -0.55
ATG4B-201ENST00000344376 TRAV10A0A0B4J240 114 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 MRPS12O15235 138 aaKnown RBP11.58□□□□□ -0.56
ATG4B-201ENST00000344376 MPC2O95563 127 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 HBE1P02100 147 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 M6PRP20645 277 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 HIST1H1AQ02539 215 aaPredicted RBP11.58□□□□□ -0.56
ATG4B-201ENST00000344376 AMTNQ6UX39 209 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 Q6ZTC4 211 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 CCDC28AQ8IWP9 274 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 KCNRGQ8N5I3 272 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 IGF2BP2-AS1Q96M15 143 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 TMEM208Q9BTX3 173 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 PPP1R14DQ9NXH3 145 aa11.58□□□□□ -0.56
ATG4B-201ENST00000344376 PXMP4Q9Y6I8 212 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms