RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 ATP5J2P56134 94 aa11.71□□□□□ -0.53
PBX3-201ENST00000342287 HSPE1P61604 102 aaKnown RBP11.71□□□□□ -0.53
PBX3-201ENST00000342287 GAGE5Q13069 117 aa11.71□□□□□ -0.53
PBX3-201ENST00000342287 GAGE6Q13070 117 aa11.71□□□□□ -0.53
PBX3-201ENST00000342287 SRSF8Q9BRL6 282 aaKnown RBP11.71□□□□□ -0.53
PBX3-201ENST00000342287 PIMREGQ9BSJ6 248 aa11.71□□□□□ -0.53
PBX3-201ENST00000342287 TECRQ9NZ01 308 aaKnown RBP11.71□□□□□ -0.53
PBX3-201ENST00000342287 TCF19Q9Y242 345 aa11.71□□□□□ -0.53
PBX3-201ENST00000342287 TIMM9Q9Y5J7 89 aa11.71□□□□□ -0.53
PBX3-201ENST00000342287 SAA1P0DJI8 122 aaPredicted RBP11.71□□□□□ -0.54
PBX3-201ENST00000342287 RPEQ96AT9 228 aa11.71□□□□□ -0.54
PBX3-201ENST00000342287 TMEM191AQ9H0A3 160 aa11.71□□□□□ -0.54
PBX3-201ENST00000342287 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.54
PBX3-201ENST00000342287 V9GYV3 84 aa11.71□□□□□ -0.54
PBX3-201ENST00000342287 IGHV1-3A0A0C4DH29 117 aa11.7□□□□□ -0.54
PBX3-201ENST00000342287 LY6LH3BQJ8 138 aa11.7□□□□□ -0.54
PBX3-201ENST00000342287 AMY1AP04745 511 aa11.7□□□□□ -0.54
PBX3-201ENST00000342287 ZNF418Q8TF45 676 aaPredicted RBP11.7□□□□□ -0.54
PBX3-201ENST00000342287 HEYLQ9NQ87 328 aaPredicted RBP11.7□□□□□ -0.54
PBX3-201ENST00000342287 SYS1-DBNDD2H3BUS1 97 aa11.7□□□□□ -0.54
PBX3-201ENST00000342287 GCSAMLQ5JQS6 135 aa11.7□□□□□ -0.54
PBX3-201ENST00000342287 SPAG8Q99932 426 aaPredicted RBP11.7□□□□□ -0.54
PBX3-201ENST00000342287 ZNF257Q9Y2Q1 563 aa11.7□□□□□ -0.54
PBX3-201ENST00000342287 VDAC2P45880 294 aaPredicted RBP11.69□□□□□ -0.54
PBX3-201ENST00000342287 RPL8P62917 257 aaKnown RBP11.69□□□□□ -0.54
PBX3-201ENST00000342287 C10orf105Q8TEF2 133 aa11.69□□□□□ -0.54
PBX3-201ENST00000342287 DPM3Q9P2X0 92 aa11.69□□□□□ -0.54
PBX3-201ENST00000342287 ERG28Q9UKR5 140 aa11.69□□□□□ -0.54
PBX3-201ENST00000342287 FOXH1O75593 365 aa11.69□□□□□ -0.54
PBX3-201ENST00000342287 SSBP2P81877 361 aaPredicted RBP11.69□□□□□ -0.54
PBX3-201ENST00000342287 VMO1Q7Z5L0 202 aa11.69□□□□□ -0.54
PBX3-201ENST00000342287 MOB3BQ86TA1 216 aa11.69□□□□□ -0.54
PBX3-201ENST00000342287 RNASE7Q9H1E1 156 aaKnown RBP11.69□□□□□ -0.54
PBX3-201ENST00000342287 IGHV3-72A0A0B4J1Y9 119 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 WFDC2Q14508 124 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 HCP5Q6MZN7 132 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 SH2D6Q7Z4S9 175 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 ENY2Q9NPA8 101 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 PMS2P5A8MQ11 134 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 ODF3BA8MYP8 253 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 IGLV2-23P01705 113 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 TIMM8BQ9Y5J9 83 aaPredicted RBP11.68□□□□□ -0.54
PBX3-201ENST00000342287 AKAP6Q13023 2319 aa11.68□□□□□ -0.54
PBX3-201ENST00000342287 TEX50A0A1B0GTY4 177 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 HELTA6NFD8 242 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 KLRD1Q13241 179 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 VMA21Q3ZAQ7 101 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 TMEM167AQ8TBQ9 72 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 SIRPDQ9H106 197 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 A0A1W2PPV4 95 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 C15orf62A8K5M9 175 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 VWC2LB2RUY7 222 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 ETDBQ3ZM63 59 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 FOXI2Q6ZQN5 318 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 ZNF331Q9NQX6 463 aaPredicted RBP11.67□□□□□ -0.54
PBX3-201ENST00000342287 SPANXB1Q9NS25 103 aaPredicted RBP11.67□□□□□ -0.54
PBX3-201ENST00000342287 HSPB8Q9UJY1 196 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 PRCDQ00LT1 54 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 SAMD5Q5TGI4 173 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 RITA1Q96K30 269 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 GPR82Q96P67 336 aa11.67□□□□□ -0.54
PBX3-201ENST00000342287 MYOD1P15172 320 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 VWC2Q2TAL6 325 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 COX19Q49B96 90 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 NRGNQ92686 78 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 ANAPC13Q9BS18 74 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 NPCDR1Q9BY65 106 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 A0A1W2PPI3 338 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 LEPROTL1O95214 131 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 COX8AP10176 69 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 HOXB4P17483 251 aaPredicted RBP11.66□□□□□ -0.54
PBX3-201ENST00000342287 TCTAP57738 103 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 NDFIP1Q9BT67 221 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 PLEKHA3Q9HB20 300 aa11.66□□□□□ -0.54
PBX3-201ENST00000342287 ARHGAP32A7KAX9 2087 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 INSL3P51460 131 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 DSCR9P59020 149 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 RNF5Q99942 180 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 TMEM147Q9BVK8 224 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 IGHV4-61A0A0C4DH41 118 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 FCGR2BP31994 310 aaPredicted RBP11.65□□□□□ -0.54
PBX3-201ENST00000342287 GNG4P50150 75 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 C8orf86Q6ZUL3 223 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 TEX45Q8NA69 505 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 OR1L8Q8NGR8 309 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.54
PBX3-201ENST00000342287 RRHO14718 337 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 CRXO43186 299 aaPredicted RBP11.64□□□□□ -0.55
PBX3-201ENST00000342287 ARL14EPLP0DKL9 152 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 ARPC1AQ92747 370 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 MBD6Q96DN6 1003 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 NDUFA4L2Q9NRX3 87 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 TIMM23O14925 209 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 MINOS1Q5TGZ0 78 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 TMEM116Q8NCL8 245 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 MINOS1-NBL1R4GNA1 71 aa11.64□□□□□ -0.55
PBX3-201ENST00000342287 IGHV4-30-2A0A087WSY4 118 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms