RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 Q9H3A6 140 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 C7orf69Q9H7B7 122 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 TMEM242Q9NWH2 141 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 TRAPPC1Q9Y5R8 145 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 PRRC2AP48634 2157 aaKnown RBP9.87□□□□□ -0.83
LIMK1-201ENST00000336180 FAM106CPP0CH98 169 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 UBE2E1P51965 193 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 ATP5IP56385 69 aaPredicted RBP9.87□□□□□ -0.83
LIMK1-201ENST00000336180 TMEM249Q2WGJ8 235 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 KCNIP4Q6PIL6 250 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 ZNF562Q6V9R5 426 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 NPBQ8NG41 125 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 SMIM12Q96EX1 92 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 UBR5O95071 2799 aaPredicted RBP9.87□□□□□ -0.83
LIMK1-201ENST00000336180 ACANP16112 2415 aa9.87□□□□□ -0.83
LIMK1-201ENST00000336180 F2Z2F3 143 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 HLA-DMBP28068 263 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 LINC00322Q6ZN03 302 aaPredicted RBP9.86□□□□□ -0.83
LIMK1-201ENST00000336180 GOLT1AQ6ZVE7 132 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 SRD5A3Q9H8P0 318 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 GP9P14770 177 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 ZNF843Q8N446 348 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 CST9LQ9H4G1 147 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 NOTCH2Q04721 2471 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 A0A1W2PRE2 83 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 F8W735 103 aaPredicted RBP9.86□□□□□ -0.83
LIMK1-201ENST00000336180 NUPR1O60356 82 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 BRI3O95415 125 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 CNN1P51911 297 aaKnown RBP9.86□□□□□ -0.83
LIMK1-201ENST00000336180 IBA57Q5T440 356 aaKnown RBP9.86□□□□□ -0.83
LIMK1-201ENST00000336180 HIST2H2BDQ6DRA6 164 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 PRNTQ86SH4 94 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 TMEM256Q8N2U0 113 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 CIARTQ8N365 385 aaPredicted RBP9.86□□□□□ -0.83
LIMK1-201ENST00000336180 C11orf52Q96A22 123 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 RNF125Q96EQ8 232 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 V9GYV3 84 aa9.86□□□□□ -0.83
LIMK1-201ENST00000336180 ADMP35318 185 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 UBE2G1P62253 170 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 C15orf32Q32M92 178 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 CLEC19AQ6UXS0 136 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 ZNF491Q8N8L2 437 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 C10orf105Q8TEF2 133 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 C21orf62Q9NYP8 219 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 APCP25054 2843 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 Q8N6K4 173 aa9.85□□□□□ -0.83
LIMK1-201ENST00000336180 IGHV3-11P01762 117 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 RHOGP84095 191 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 IGF2BP2-AS1Q96M15 143 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 DUX5Q96PT3 197 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 MEGF9Q9H1U4 602 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 EPDR1Q9UM22 224 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 MYO9AB2RTY4 2548 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 IGLV11-55A0A075B6I3 123 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 AMBPP02760 352 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 TCF24Q7RTU0 167 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 MUC21A0A0G2JKD1 596 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 MUC21A0A140T8X8 626 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 H3BUX3 64 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 BLCAPP62952 87 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 HERV-K104P63124 156 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 MUC21Q5SSG8 566 aa9.84□□□□□ -0.83
LIMK1-201ENST00000336180 IGKV3-7A0A075B6H7 116 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 SNURFLB1AK76 121 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 CAMPP49913 170 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 MINOS1Q5TGZ0 78 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 PYGO2Q9BRQ0 406 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 C19orf24Q9BVV8 132 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 SSBP4Q9BWG4 385 aaPredicted RBP9.83□□□□□ -0.84
LIMK1-201ENST00000336180 MINOS1-NBL1R4GNA1 71 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 SRP14P37108 136 aaKnown RBP9.83□□□□□ -0.84
LIMK1-201ENST00000336180 MFAP4P55083 255 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 RPEL1Q2QD12 228 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 OR2D3Q8NGH3 330 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 RNF5Q99942 180 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 IL36BQ9NZH7 164 aa9.83□□□□□ -0.84
LIMK1-201ENST00000336180 TBL2Q9Y4P3 447 aaKnown RBP9.83□□□□□ -0.84
LIMK1-201ENST00000336180 TMSB15BA0A087X1C1 80 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 A0A1B0GV72 72 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 ZNF705FA8MVS1 300 aaPredicted RBP9.82□□□□□ -0.84
LIMK1-201ENST00000336180 SAMD13Q5VXD3 122 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 TPPP3Q9BW30 176 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 HELZ2Q9BYK8 2649 aaKnown RBP9.82□□□□□ -0.84
LIMK1-201ENST00000336180 NF1P21359 2839 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 IGHV1-69DA0A0B4J2H0 117 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 A0A1B0GW15 77 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 IGHV1-69P01742 117 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 ACTL10Q5JWF8 245 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 C1orf194Q5T5A4 169 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 PVRIGQ6DKI7 326 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 ERASQ7Z444 233 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 CMTM2Q8TAZ6 248 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 TXNDC17Q9BRA2 123 aa9.82□□□□□ -0.84
LIMK1-201ENST00000336180 C9JCJ5 164 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 RNF223E7ERA6 249 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 APOHP02749 345 aaPredicted RBP9.81□□□□□ -0.84
LIMK1-201ENST00000336180 CTSGP08311 255 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 STPG4Q8N801 248 aa9.81□□□□□ -0.84
LIMK1-201ENST00000336180 MRPL18Q9H0U6 180 aaKnown RBP9.81□□□□□ -0.84
LIMK1-201ENST00000336180 SCGB1D1O95968 90 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms