RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 NIPBLQ6KC79 2804 aaeCLIP17.93■□□□□ 0.46
TSEN54-201ENST00000333213 XKRY2A2RUG3 117 aa17.93■□□□□ 0.46
TSEN54-201ENST00000333213 ELANEP08246 267 aa17.93■□□□□ 0.46
TSEN54-201ENST00000333213 REC114Q7Z4M0 266 aa17.93■□□□□ 0.46
TSEN54-201ENST00000333213 OR4X2Q8NGF9 303 aa17.93■□□□□ 0.46
TSEN54-201ENST00000333213 IGHV3OR16-8A0A075B7F1 116 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 NPPCP23582 126 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 LINC01551Q86U37 167 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 SLC25A2Q9BXI2 301 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 GNB4Q9HAV0 340 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 DDTP30046 118 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 FOXL1Q12952 345 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 TCTEX1D4Q5JR98 221 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 ZNF600Q6ZNG1 722 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 WIPF2Q8TF74 440 aaPredicted RBP17.92■□□□□ 0.46
TSEN54-201ENST00000333213 JMJD8Q96S16 334 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 MRPL32Q9BYC8 188 aaKnown RBP17.92■□□□□ 0.46
TSEN54-201ENST00000333213 ZFAND3Q9H8U3 227 aa17.92■□□□□ 0.46
TSEN54-201ENST00000333213 A0A1W2PPQ1 181 aa17.91■□□□□ 0.46
TSEN54-201ENST00000333213 LEMD1Q68G75 181 aa17.91■□□□□ 0.46
TSEN54-201ENST00000333213 TOMM20LQ6UXN7 152 aa17.91■□□□□ 0.46
TSEN54-201ENST00000333213 LINC01006Q8NI28 216 aa17.91■□□□□ 0.46
TSEN54-201ENST00000333213 C14orf144Q96I85 54 aa17.91■□□□□ 0.46
TSEN54-201ENST00000333213 ELOVL1Q9BW60 279 aa17.91■□□□□ 0.46
TSEN54-201ENST00000333213 C8orf88P0DMB2 117 aa17.9■□□□□ 0.46
TSEN54-201ENST00000333213 ARL3P36405 182 aa17.9■□□□□ 0.46
TSEN54-201ENST00000333213 SLC25A39Q9BZJ4 359 aaPredicted RBP17.9■□□□□ 0.46
TSEN54-201ENST00000333213 C16orf95Q9H693 158 aa17.9■□□□□ 0.46
TSEN54-201ENST00000333213 HIGD1AQ9Y241 93 aa17.9■□□□□ 0.46
TSEN54-201ENST00000333213 CXorf1O96002 111 aa17.9■□□□□ 0.46
TSEN54-201ENST00000333213 LBHQ53QV2 105 aaPredicted RBP17.9■□□□□ 0.46
TSEN54-201ENST00000333213 HIST2H2BDQ6DRA6 164 aa17.9■□□□□ 0.46
TSEN54-201ENST00000333213 OR5AU1Q8NGC0 362 aa17.9■□□□□ 0.46
TSEN54-201ENST00000333213 RNF2Q99496 336 aa17.9■□□□□ 0.46
TSEN54-201ENST00000333213 TECRQ9NZ01 308 aaKnown RBP17.9■□□□□ 0.46
TSEN54-201ENST00000333213 TCF21O43680 179 aa17.89■□□□□ 0.45
TSEN54-201ENST00000333213 SCGB2A1O75556 95 aa17.89■□□□□ 0.45
TSEN54-201ENST00000333213 GZMBP10144 247 aa17.89■□□□□ 0.45
TSEN54-201ENST00000333213 TMEM18Q96B42 140 aa17.89■□□□□ 0.45
TSEN54-201ENST00000333213 BMPR1BO00238 502 aa17.88■□□□□ 0.45
TSEN54-201ENST00000333213 GCHFRP30047 84 aa17.88■□□□□ 0.45
TSEN54-201ENST00000333213 TRAV9-1A0A075B6T8 112 aa17.88■□□□□ 0.45
TSEN54-201ENST00000333213 CLPSL1A2RUU4 121 aa17.88■□□□□ 0.45
TSEN54-201ENST00000333213 PYYP10082 97 aa17.87■□□□□ 0.45
TSEN54-201ENST00000333213 UBE2E2Q96LR5 201 aa17.87■□□□□ 0.45
TSEN54-201ENST00000333213 H3BRN7 92 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 OR7C2O60412 319 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 OR10J4P0C629 311 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 TAS2R45P59539 299 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 UNQ9165/PRO28630Q6UXU0 137 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 C18orf65Q6ZTR6 163 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 SHANK2-AS3Q9BTD1 123 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 PEF1Q9UBV8 284 aaKnown RBP17.86■□□□□ 0.45
TSEN54-201ENST00000333213 ARL2-SNX15V9GYD0 113 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 SETD2Q9BYW2 2564 aaPredicted RBP17.86■□□□□ 0.45
TSEN54-201ENST00000333213 ATP5G3P48201 142 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 CNN1P51911 297 aaKnown RBP17.86■□□□□ 0.45
TSEN54-201ENST00000333213 RELQ04864 619 aaPredicted RBP17.86■□□□□ 0.45
TSEN54-201ENST00000333213 PQLC2Q6ZP29 291 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 LY96Q9Y6Y9 160 aa17.86■□□□□ 0.45
TSEN54-201ENST00000333213 SNRPCP09234 159 aaKnown RBP17.85■□□□□ 0.45
TSEN54-201ENST00000333213 CST9LP1Q5W188 147 aa17.85■□□□□ 0.45
TSEN54-201ENST00000333213 NDUFB4O95168 129 aa17.84■□□□□ 0.45
TSEN54-201ENST00000333213 NDUFA7O95182 113 aa17.84■□□□□ 0.45
TSEN54-201ENST00000333213 UBE2G2P60604 165 aa17.84■□□□□ 0.45
TSEN54-201ENST00000333213 SSTP61278 116 aa17.84■□□□□ 0.45
TSEN54-201ENST00000333213 SFRP2Q96HF1 295 aa17.84■□□□□ 0.45
TSEN54-201ENST00000333213 TEP1Q99973 2627 aaKnown RBP17.83■□□□□ 0.45
TSEN54-201ENST00000333213 LGALS1P09382 135 aaKnown RBP17.83■□□□□ 0.44
TSEN54-201ENST00000333213 GP9P14770 177 aa17.83■□□□□ 0.44
TSEN54-201ENST00000333213 C11orf52Q96A22 123 aa17.83■□□□□ 0.44
TSEN54-201ENST00000333213 FXYD5Q96DB9 178 aa17.83■□□□□ 0.44
TSEN54-201ENST00000333213 RABAC1Q9UI14 185 aa17.83■□□□□ 0.44
TSEN54-201ENST00000333213 GBGT1Q8N5D6 347 aa17.82■□□□□ 0.44
TSEN54-201ENST00000333213 PAXXQ9BUH6 204 aa17.82■□□□□ 0.44
TSEN54-201ENST00000333213 YTHDF2Q9Y5A9 579 aaKnown RBP17.82■□□□□ 0.44
TSEN54-201ENST00000333213 ZNF207O43670 478 aaKnown RBP17.82■□□□□ 0.44
TSEN54-201ENST00000333213 TRAPPC1Q9Y5R8 145 aa17.82■□□□□ 0.44
TSEN54-201ENST00000333213 C2CD3Q4AC94 2353 aa17.81■□□□□ 0.44
TSEN54-201ENST00000333213 A8MWP6 167 aa17.81■□□□□ 0.44
TSEN54-201ENST00000333213 C9JCJ5 164 aa17.81■□□□□ 0.44
TSEN54-201ENST00000333213 NDUFA4O00483 81 aa17.81■□□□□ 0.44
TSEN54-201ENST00000333213 APOHP02749 345 aaPredicted RBP17.81■□□□□ 0.44
TSEN54-201ENST00000333213 C11orf44Q8N8P7 122 aa17.81■□□□□ 0.44
TSEN54-201ENST00000333213 MAST4O15021 2626 aa17.81■□□□□ 0.44
TSEN54-201ENST00000333213 ZNF320A2RRD8 509 aa17.8■□□□□ 0.44
TSEN54-201ENST00000333213 HAX1O00165 279 aa17.8■□□□□ 0.44
TSEN54-201ENST00000333213 MRPS12O15235 138 aaKnown RBP17.8■□□□□ 0.44
TSEN54-201ENST00000333213 UBE2L3P68036 154 aaKnown RBP17.8■□□□□ 0.44
TSEN54-201ENST00000333213 IQCJQ1A5X6 159 aa17.8■□□□□ 0.44
TSEN54-201ENST00000333213 CD28P10747 220 aa17.8■□□□□ 0.44
TSEN54-201ENST00000333213 TMEM167BQ9NRX6 74 aa17.8■□□□□ 0.44
TSEN54-201ENST00000333213 IGHV4OR15-8A0A075B7B6 117 aa17.79■□□□□ 0.44
TSEN54-201ENST00000333213 A0A087WW49 117 aa17.79■□□□□ 0.44
TSEN54-201ENST00000333213 PROK1P58294 105 aa17.79■□□□□ 0.44
TSEN54-201ENST00000333213 C2orf88Q9BSF0 95 aa17.79■□□□□ 0.44
TSEN54-201ENST00000333213 PRO1933Q9H354 126 aa17.79■□□□□ 0.44
TSEN54-201ENST00000333213 RNF114Q9Y508 228 aa17.79■□□□□ 0.44
TSEN54-201ENST00000333213 BUB3O43684 328 aa17.78■□□□□ 0.44
TSEN54-201ENST00000333213 CRYBB3P26998 211 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms