RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 RNF182Q8N6D2 247 aa19.98■□□□□ 0.79
ATPAF1-201ENST00000329231 CHAC2Q8WUX2 184 aa19.98■□□□□ 0.79
ATPAF1-201ENST00000329231 DNAJC4Q9NNZ3 241 aa19.98■□□□□ 0.79
ATPAF1-201ENST00000329231 MPDU1O75352 247 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 DUSP14O95147 198 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 FGF7P21781 194 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 RPL29P47914 159 aaKnown RBP19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 PRR20EP86478 221 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 PRR20CP86479 221 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 PRR20DP86480 221 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 PRR20BP86481 221 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 PRR20AP86496 221 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 BPIFA4PQ86YQ2 179 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 OR1L4Q8NGR5 311 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 ASB13Q8WXK3 278 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 SLC35B3Q9H1N7 401 aa19.97■□□□□ 0.79
ATPAF1-201ENST00000329231 MRPS12O15235 138 aaKnown RBP19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 RPL12P30050 165 aaKnown RBP19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 CLINT1Q14677 625 aa19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 ZNF705AQ6ZN79 300 aaPredicted RBP19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 ZNF738Q8NE65 137 aa19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 THAP6Q8TBB0 222 aa19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 HSPB11Q9Y547 144 aa19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 RYR2Q92736 4967 aa19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 LYSTQ99698 3801 aa19.96■□□□□ 0.79
ATPAF1-201ENST00000329231 A8MTW9 85 aa19.95■□□□□ 0.78
ATPAF1-201ENST00000329231 CXCL2P19875 107 aa19.95■□□□□ 0.78
ATPAF1-201ENST00000329231 OPCMLQ14982 345 aa19.95■□□□□ 0.78
ATPAF1-201ENST00000329231 PFDN5Q99471 154 aa19.95■□□□□ 0.78
ATPAF1-201ENST00000329231 NEU1Q99519 415 aa19.95■□□□□ 0.78
ATPAF1-201ENST00000329231 GIPP09681 153 aaPredicted RBP19.94■□□□□ 0.78
ATPAF1-201ENST00000329231 B2MP61769 119 aa19.94■□□□□ 0.78
ATPAF1-201ENST00000329231 LCN15Q6UWW0 184 aa19.94■□□□□ 0.78
ATPAF1-201ENST00000329231 SLC39A9Q9NUM3 307 aa19.94■□□□□ 0.78
ATPAF1-201ENST00000329231 SMIM9A6NGZ8 99 aa19.93■□□□□ 0.78
ATPAF1-201ENST00000329231 ZNF705FA8MVS1 300 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-201ENST00000329231 ZNF705DP0CH99 300 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-201ENST00000329231 ZNF705BP0CI00 300 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-201ENST00000329231 CNN1P51911 297 aaKnown RBP19.93■□□□□ 0.78
ATPAF1-201ENST00000329231 NPCDR1Q9BY65 106 aa19.93■□□□□ 0.78
ATPAF1-201ENST00000329231 GOLT1BQ9Y3E0 138 aa19.93■□□□□ 0.78
ATPAF1-201ENST00000329231 IGHV3OR16-12A0A075B7B8 117 aa19.92■□□□□ 0.78
ATPAF1-201ENST00000329231 PSG3Q16557 428 aa19.92■□□□□ 0.78
ATPAF1-201ENST00000329231 MORN5Q5VZ52 161 aa19.92■□□□□ 0.78
ATPAF1-201ENST00000329231 AMTNQ6UX39 209 aa19.92■□□□□ 0.78
ATPAF1-201ENST00000329231 ATP5SQ99766 215 aa19.92■□□□□ 0.78
ATPAF1-201ENST00000329231 SLC50A1Q9BRV3 221 aa19.92■□□□□ 0.78
ATPAF1-201ENST00000329231 PXMP4Q9Y6I8 212 aa19.92■□□□□ 0.78
ATPAF1-201ENST00000329231 C11orf94C9JXX5 98 aa19.91■□□□□ 0.78
ATPAF1-201ENST00000329231 AMBPP02760 352 aa19.91■□□□□ 0.78
ATPAF1-201ENST00000329231 LINC00476Q8WZB0 136 aa19.91■□□□□ 0.78
ATPAF1-201ENST00000329231 HLA-DMBP28068 263 aa19.9■□□□□ 0.78
ATPAF1-201ENST00000329231 WDR61Q9GZS3 305 aaKnown RBP19.9■□□□□ 0.78
ATPAF1-201ENST00000329231 ZNF331Q9NQX6 463 aaPredicted RBP19.9■□□□□ 0.78
ATPAF1-201ENST00000329231 TMEM189A5PLL7 270 aa19.89■□□□□ 0.77
ATPAF1-201ENST00000329231 OR8A1Q8NGG7 326 aa19.89■□□□□ 0.77
ATPAF1-201ENST00000329231 C2CD4CQ8TF44 421 aa19.89■□□□□ 0.77
ATPAF1-201ENST00000329231 SNRPCP09234 159 aaKnown RBP19.88■□□□□ 0.77
ATPAF1-201ENST00000329231 IGLC2P0DOY2 106 aa19.88■□□□□ 0.77
ATPAF1-201ENST00000329231 HIST1H1AQ02539 215 aaPredicted RBP19.88■□□□□ 0.77
ATPAF1-201ENST00000329231 RPUSD4Q96CM3 377 aaKnown RBP19.88■□□□□ 0.77
ATPAF1-201ENST00000329231 IGF2BP2-AS1Q96M15 143 aa19.88■□□□□ 0.77
ATPAF1-201ENST00000329231 KCNIP2Q9NS61 270 aa19.88■□□□□ 0.77
ATPAF1-201ENST00000329231 RFNGQ9Y644 331 aa19.88■□□□□ 0.77
ATPAF1-201ENST00000329231 TRAV5A0A0B4J249 113 aa19.87■□□□□ 0.77
ATPAF1-201ENST00000329231 LY6G6CO95867 125 aa19.87■□□□□ 0.77
ATPAF1-201ENST00000329231 C1orf158Q8N1D5 194 aa19.87■□□□□ 0.77
ATPAF1-201ENST00000329231 SMIM3Q9BZL3 60 aa19.87■□□□□ 0.77
ATPAF1-201ENST00000329231 CELA1Q9UNI1 258 aa19.87■□□□□ 0.77
ATPAF1-201ENST00000329231 PLECQ15149 4684 aaKnown RBP19.86■□□□□ 0.77
ATPAF1-201ENST00000329231 GUK1Q16774 197 aa19.86■□□□□ 0.77
ATPAF1-201ENST00000329231 SPINK13Q1W4C9 94 aa19.86■□□□□ 0.77
ATPAF1-201ENST00000329231 Q5BKY6 102 aa19.86■□□□□ 0.77
ATPAF1-201ENST00000329231 PPP1R14DQ9NXH3 145 aa19.86■□□□□ 0.77
ATPAF1-201ENST00000329231 C17orf112F2Z3M2 114 aa19.85■□□□□ 0.77
ATPAF1-201ENST00000329231 IFNA5P01569 189 aa19.85■□□□□ 0.77
ATPAF1-201ENST00000329231 HBE1P02100 147 aa19.85■□□□□ 0.77
ATPAF1-201ENST00000329231 RHOBP62745 196 aa19.85■□□□□ 0.77
ATPAF1-201ENST00000329231 Q6ZTC4 211 aa19.85■□□□□ 0.77
ATPAF1-201ENST00000329231 TMEM208Q9BTX3 173 aa19.85■□□□□ 0.77
ATPAF1-201ENST00000329231 TRAV10A0A0B4J240 114 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 H3BQ15 152 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 H3BTX0 84 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 BOLA2-SMG1P6H3BVE0 249 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 M0R2Z0 102 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 SLC17A3O00476 420 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 INSP01308 110 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 TCTAP57738 103 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 SCGB1C1Q8TD33 95 aa19.84■□□□□ 0.77
ATPAF1-201ENST00000329231 DNAH1Q9P2D7 4330 aa19.83■□□□□ 0.77
ATPAF1-201ENST00000329231 EMP1P54849 157 aa19.83■□□□□ 0.77
ATPAF1-201ENST00000329231 C12orf74Q32Q52 190 aa19.83■□□□□ 0.77
ATPAF1-201ENST00000329231 OR2T35Q8NGX2 323 aa19.83■□□□□ 0.77
ATPAF1-201ENST00000329231 SAT2Q96F10 170 aaPredicted RBP19.83■□□□□ 0.77
ATPAF1-201ENST00000329231 AQP10Q96PS8 301 aa19.83■□□□□ 0.77
ATPAF1-201ENST00000329231 PARD6GQ9BYG4 376 aaPredicted RBP19.83■□□□□ 0.77
ATPAF1-201ENST00000329231 ALMS1Q8TCU4 4167 aa19.83■□□□□ 0.76
ATPAF1-201ENST00000329231 SPART-AS1P0CW21 52 aa19.82■□□□□ 0.76
ATPAF1-201ENST00000329231 RRN3P1Q2M238 152 aa19.82■□□□□ 0.76
ATPAF1-201ENST00000329231 WFDC1Q9HC57 220 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms