RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 ESDP10768 282 aa12.52□□□□□ -0.41
PTPN21-201ENST00000328736 UBE2E1P51965 193 aa12.52□□□□□ -0.41
PTPN21-201ENST00000328736 GLRX5Q86SX6 157 aa12.52□□□□□ -0.41
PTPN21-201ENST00000328736 ZNF625Q96I27 306 aaPredicted RBP12.52□□□□□ -0.41
PTPN21-201ENST00000328736 RP1L1Q8IWN7 2480 aaPredicted RBP12.52□□□□□ -0.41
PTPN21-201ENST00000328736 LINC00205P59089 165 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 CT83Q5H943 113 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 IGFL4Q6B9Z1 124 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 Q86TA4 180 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 TMEM141Q96I45 108 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 CHAC1Q9BUX1 264 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 LYPD2Q6UXB3 125 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 IL17RELQ6ZVW7 336 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 HIST3H2BBQ8N257 126 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 SEC16AO15027 2179 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 IGKV1D-17A0A075B6S4 117 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 TRAV8-1A0A0A6YYK1 113 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 NDUFB8O95169 186 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 ZNF114Q8NC26 417 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 CGB3P0DN86 165 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 HGFACQ04756 655 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 NTF4P34130 210 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 CABIN1Q9Y6J0 2220 aa12.51□□□□□ -0.41
PTPN21-201ENST00000328736 RNASE2P10153 161 aaKnown RBP12.5□□□□□ -0.41
PTPN21-201ENST00000328736 TMEM75Q8N9X5 138 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 PMVKQ15126 192 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 SUMO4Q6EEV6 95 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 LINC00473A8K010 186 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 PNRC2Q9NPJ4 139 aaKnown RBP12.5□□□□□ -0.41
PTPN21-201ENST00000328736 GAGE12JA6NER3 117 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 CXCL1P09341 107 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 GAGE1Q13065 139 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 GAGE4Q13068 117 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 GAGE5Q13069 117 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 C17orf82Q86X59 251 aaPredicted RBP12.5□□□□□ -0.41
PTPN21-201ENST00000328736 THAP8Q8NA92 274 aa12.5□□□□□ -0.41
PTPN21-201ENST00000328736 E7EQL1 145 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 RUSC1-AS1Q66K80 236 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 SYS1-DBNDD2H3BUS1 97 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 SOCS3O14543 225 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 I3L3M4 83 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 AZU1P20160 251 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 Q96MF0 132 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 SVILO95425 2214 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 IGHV1-69DA0A0B4J2H0 117 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 hDV102S1A0JD36 115 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 IGHV1-69P01742 117 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 ARMS2P0C7Q2 107 aa12.49□□□□□ -0.41
PTPN21-201ENST00000328736 J3QLI3 93 aa12.48□□□□□ -0.41
PTPN21-201ENST00000328736 XCL2Q9UBD3 114 aa12.48□□□□□ -0.41
PTPN21-201ENST00000328736 GATA4P43694 442 aa12.48□□□□□ -0.41
PTPN21-201ENST00000328736 DKK1O94907 266 aa12.48□□□□□ -0.41
PTPN21-201ENST00000328736 Q6ZS49 121 aa12.48□□□□□ -0.41
PTPN21-201ENST00000328736 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
PTPN21-201ENST00000328736 TRPM7Q96QT4 1865 aa12.48□□□□□ -0.41
PTPN21-201ENST00000328736 AMN1Q8IY45 258 aa12.48□□□□□ -0.41
PTPN21-201ENST00000328736 SMKR1H3BMG3 65 aa12.47□□□□□ -0.41
PTPN21-201ENST00000328736 MST1LQ2TV78 715 aa12.47□□□□□ -0.41
PTPN21-201ENST00000328736 CYTL1Q9NRR1 136 aa12.47□□□□□ -0.41
PTPN21-201ENST00000328736 ATP6V0E1O15342 81 aa12.47□□□□□ -0.41
PTPN21-201ENST00000328736 A6NNC1 897 aa12.47□□□□□ -0.41
PTPN21-201ENST00000328736 ZC2HC1BQ5TFG8 222 aa12.47□□□□□ -0.41
PTPN21-201ENST00000328736 C15orf62A8K5M9 175 aa12.46□□□□□ -0.41
PTPN21-201ENST00000328736 INAFM2P0DMQ5 153 aa12.46□□□□□ -0.41
PTPN21-201ENST00000328736 CFHR3Q02985 330 aa12.46□□□□□ -0.41
PTPN21-201ENST00000328736 C1orf194Q5T5A4 169 aa12.46□□□□□ -0.41
PTPN21-201ENST00000328736 CGB7P0DN87 165 aa12.46□□□□□ -0.41
PTPN21-201ENST00000328736 YPEL3P61236 119 aaPredicted RBP12.46□□□□□ -0.41
PTPN21-201ENST00000328736 TMEM243Q9BU79 118 aa12.46□□□□□ -0.42
PTPN21-201ENST00000328736 ZMAT4Q9H898 229 aa12.46□□□□□ -0.42
PTPN21-201ENST00000328736 SIP14410 1827 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 A0A087X0K7 114 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 B3GALT5-AS1P59052 145 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 ZNF492Q9P255 531 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 LHBP01229 141 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 RP1P56715 2156 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 KIR3DS1Q14943 382 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 PFN1P07737 140 aaKnown RBP12.45□□□□□ -0.42
PTPN21-201ENST00000328736 MAP1BP46821 2468 aaKnown RBP12.45□□□□□ -0.42
PTPN21-201ENST00000328736 VWC2Q2TAL6 325 aa12.45□□□□□ -0.42
PTPN21-201ENST00000328736 IGHV1OR15-1A0A075B7D0 117 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 IGHV2-70DA0A0C4DH43 119 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 K7ENP7 123 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 C3orf79P0CE67 100 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 SPINK13Q1W4C9 94 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 MMP23AO75900 390 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 LY6HO94772 140 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 NAA38Q9BRA0 125 aaKnown RBP12.44□□□□□ -0.42
PTPN21-201ENST00000328736 C9JAW5 83 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 PRSS46E5RG02 174 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 PKIGQ9Y2B9 76 aa12.44□□□□□ -0.42
PTPN21-201ENST00000328736 ASXL3Q9C0F0 2248 aa12.43□□□□□ -0.42
PTPN21-201ENST00000328736 DOCK6Q96HP0 2047 aa12.43□□□□□ -0.42
PTPN21-201ENST00000328736 KNCNA6PVL3 124 aa12.43□□□□□ -0.42
PTPN21-201ENST00000328736 FOXL2NBQ6ZUU3 175 aa12.43□□□□□ -0.42
PTPN21-201ENST00000328736 KLF5Q13887 457 aaPredicted RBP12.43□□□□□ -0.42
PTPN21-201ENST00000328736 MRPL52Q86TS9 123 aaKnown RBP12.43□□□□□ -0.42
PTPN21-201ENST00000328736 A0A1W2PPI3 338 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms