RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 WFDC11Q8NEX6 87 aa11.54□□□□□ -0.56
TPM3-205ENST00000328159 AAMDCQ9H7C9 122 aa11.54□□□□□ -0.56
TPM3-205ENST00000328159 VPREB3Q9UKI3 123 aa11.54□□□□□ -0.56
TPM3-205ENST00000328159 SMAD5-AS1Q9Y6J3 95 aa11.54□□□□□ -0.56
TPM3-205ENST00000328159 TRBV6-1A0A0K0K1D8 114 aa11.53□□□□□ -0.56
TPM3-205ENST00000328159 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
TPM3-205ENST00000328159 MLST8Q9BVC4 326 aa11.53□□□□□ -0.56
TPM3-205ENST00000328159 KLK15Q9H2R5 256 aa11.53□□□□□ -0.56
TPM3-205ENST00000328159 SERTAD4Q9NUC0 356 aa11.53□□□□□ -0.56
TPM3-205ENST00000328159 ZNF705GA8MUZ8 300 aaPredicted RBP11.52□□□□□ -0.57
TPM3-205ENST00000328159 UBE2CO00762 179 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 BUB3O43684 328 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 NDUFA6P56556 154 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 FABP9Q0Z7S8 132 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 TMEM95Q3KNT9 176 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 METTL26Q96S19 204 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 ZANQ9Y493 2812 aa11.52□□□□□ -0.57
TPM3-205ENST00000328159 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.51□□□□□ -0.57
TPM3-205ENST00000328159 TRAV8-1A0A0A6YYK1 113 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 DIRC3C9JPN6 131 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 K7EQM0 130 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 GATCO43716 136 aaKnown RBP11.51□□□□□ -0.57
TPM3-205ENST00000328159 SMUG1Q53HV7 270 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 PRR27Q6MZM9 219 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 CIARTQ8N365 385 aaPredicted RBP11.51□□□□□ -0.57
TPM3-205ENST00000328159 TMEM75Q8N9X5 138 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 PRDM13Q9H4Q3 707 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 M0R3E3 92 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 ZNF253O75346 499 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 IGHV3-11P01762 117 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 AKR1D1P51857 326 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 C1orf194Q5T5A4 169 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 PRNTQ86SH4 94 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 U3KQE9 123 aa11.51□□□□□ -0.57
TPM3-205ENST00000328159 HELZ2Q9BYK8 2649 aaKnown RBP11.51□□□□□ -0.57
TPM3-205ENST00000328159 A0A087X0K7 114 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 A0A0G2JLM5 398 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 SMIM27A0A1W2PRY6 76 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 ZNF785A8K8V0 405 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 ZNF207O43670 478 aaKnown RBP11.5□□□□□ -0.57
TPM3-205ENST00000328159 LCNL1Q6ZST4 164 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 TMEM183AQ8IXX5 376 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 GRAMD2BQ96HH9 432 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 ZNF492Q9P255 531 aa11.5□□□□□ -0.57
TPM3-205ENST00000328159 IGHV3-66A0A0C4DH42 116 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 HOXA3O43365 443 aaPredicted RBP11.49□□□□□ -0.57
TPM3-205ENST00000328159 IGHG4P01861 327 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 APOHP02749 345 aaPredicted RBP11.49□□□□□ -0.57
TPM3-205ENST00000328159 CSN1S1P47710 185 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 PSG3Q16557 428 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 ARL6IP6Q8N6S5 226 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 PSG8Q9UQ74 426 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 SERTM2A0A1B0GWG4 89 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 NDUFA4O00483 81 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 SMAD7O15105 426 aaKnown RBP11.49□□□□□ -0.57
TPM3-205ENST00000328159 HOXA5P20719 270 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 TCL1AP56279 114 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 PRSS22Q9GZN4 317 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 TRAPPC1Q9Y5R8 145 aa11.49□□□□□ -0.57
TPM3-205ENST00000328159 ITPR3Q14573 2671 aa11.48□□□□□ -0.57
TPM3-205ENST00000328159 ZFHX3Q15911 3703 aa11.48□□□□□ -0.57
TPM3-205ENST00000328159 IGHV3OR16-13A0A075B7E8 117 aa11.48□□□□□ -0.57
TPM3-205ENST00000328159 IGHV3-49A0A0A0MS15 119 aa11.48□□□□□ -0.57
TPM3-205ENST00000328159 IGHV3-74A0A0B4J1X5 117 aa11.48□□□□□ -0.57
TPM3-205ENST00000328159 TMEM89A2RUT3 159 aa11.48□□□□□ -0.57
TPM3-205ENST00000328159 CA1P00915 261 aaPredicted RBP11.48□□□□□ -0.57
TPM3-205ENST00000328159 PRB4P10163 310 aaPredicted RBP11.48□□□□□ -0.57
TPM3-205ENST00000328159 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
TPM3-205ENST00000328159 ZFP30Q9Y2G7 519 aa11.48□□□□□ -0.57
TPM3-205ENST00000328159 C19orf71A6NCJ1 209 aa11.47□□□□□ -0.57
TPM3-205ENST00000328159 PSMB8P28062 276 aa11.47□□□□□ -0.57
TPM3-205ENST00000328159 RPL19P84098 196 aaKnown RBP11.47□□□□□ -0.57
TPM3-205ENST00000328159 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.47□□□□□ -0.57
TPM3-205ENST00000328159 LINC00322Q6ZN03 302 aaPredicted RBP11.47□□□□□ -0.57
TPM3-205ENST00000328159 NPFFR1Q9GZQ6 430 aa11.47□□□□□ -0.57
TPM3-205ENST00000328159 IZUMO1RA6ND01 250 aa11.46□□□□□ -0.57
TPM3-205ENST00000328159 FAM209BQ5JX69 171 aa11.46□□□□□ -0.57
TPM3-205ENST00000328159 IGFL4Q6B9Z1 124 aa11.46□□□□□ -0.57
TPM3-205ENST00000328159 UNQ9165/PRO28630Q6UXU0 137 aa11.46□□□□□ -0.57
TPM3-205ENST00000328159 Q71RC1 249 aaPredicted RBP11.46□□□□□ -0.57
TPM3-205ENST00000328159 TEX29Q8N6K0 151 aa11.46□□□□□ -0.57
TPM3-205ENST00000328159 RPP21Q9H633 154 aaKnown RBP11.46□□□□□ -0.57
TPM3-205ENST00000328159 ZNF702PQ9H963 129 aa11.46□□□□□ -0.57
TPM3-205ENST00000328159 CHEK1O14757 476 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 P01737 135 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 HLA-DMBP28068 263 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 C16orf54Q6UWD8 224 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 GBGT1Q8N5D6 347 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 SIGLECL1Q8N7X8 197 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 TSKUQ8WUA8 353 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 DAZAP1Q96EP5 407 aaKnown RBP11.46□□□□□ -0.58
TPM3-205ENST00000328159 FOXC2Q99958 501 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 SLC50A1Q9BRV3 221 aa11.46□□□□□ -0.58
TPM3-205ENST00000328159 TEX15Q9BXT5 2789 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms