RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 UBE2L5PA0A1B0GUS4 154 aa10.45□□□□□ -0.74
PPP1CA-201ENST00000312989 SLC17A3O00476 420 aa10.45□□□□□ -0.74
PPP1CA-201ENST00000312989 PRAF2O60831 178 aa10.45□□□□□ -0.74
PPP1CA-201ENST00000312989 PRB4P10163 310 aaPredicted RBP10.45□□□□□ -0.74
PPP1CA-201ENST00000312989 NMES1Q9C002 83 aa10.45□□□□□ -0.74
PPP1CA-201ENST00000312989 ZNF331Q9NQX6 463 aaPredicted RBP10.45□□□□□ -0.74
PPP1CA-201ENST00000312989 APLNQ9ULZ1 77 aa10.45□□□□□ -0.74
PPP1CA-201ENST00000312989 TRAV5A0A0B4J249 113 aa10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 H3BQ15 152 aa10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 SNRPCP09234 159 aaKnown RBP10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 PVALBP20472 110 aaPredicted RBP10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 S100A7P31151 101 aa10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 S100A11P31949 105 aa10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 RPL29P47914 159 aaKnown RBP10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 FGL1Q08830 312 aa10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 ZNF767PQ75MW2 155 aa10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 SAT2Q96F10 170 aaPredicted RBP10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 GPN1Q9HCN4 374 aaPredicted RBP10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 FAT2Q9NYQ8 4349 aa10.44□□□□□ -0.74
PPP1CA-201ENST00000312989 COX7A2P2O60397 106 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 LY6G6CO95867 125 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 CXCL2P19875 107 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 NHLH2Q02577 135 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 PSG3Q16557 428 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 LGALS9CQ6DKI2 356 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 IGF2BP2-AS1Q96M15 143 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 RNF126Q9BV68 326 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 SLC39A9Q9NUM3 307 aa10.43□□□□□ -0.74
PPP1CA-201ENST00000312989 SMIM9A6NGZ8 99 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 C11orf94C9JXX5 98 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 PRAC2D3DTV9 90 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 H3BTX0 84 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 M0R2Z0 102 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 PRM2P04554 102 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 SPINK13Q1W4C9 94 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 C10orf113Q5VZT2 155 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 STX12Q86Y82 276 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 OR8A1Q8NGG7 326 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 C2CD4CQ8TF44 421 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 DNAJC4Q9NNZ3 241 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 HECTD4Q9Y4D8 3996 aa10.42□□□□□ -0.74
PPP1CA-201ENST00000312989 PLAC8L1A1L4L8 177 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 B2MP61769 119 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 ATP6V1FQ16864 119 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 LRRC37A5PQ49AS3 106 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 GCSAMLQ5JQS6 135 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 LCN15Q6UWW0 184 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 BAP18Q8IXM2 172 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 RPP25LQ8N5L8 163 aaKnown RBP10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 ZNF738Q8NE65 137 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 NPCDR1Q9BY65 106 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 DKK2Q9UBU2 259 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 PXMP4Q9Y6I8 212 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 DNAH17Q9UFH2 4485 aa10.41□□□□□ -0.74
PPP1CA-201ENST00000312989 IGHV3OR16-12A0A075B7B8 117 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 TRAV10A0A0B4J240 114 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 E5RGE8 158 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 DUSP14O95147 198 aaKnown RBP10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 FGF7P21781 194 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 HBG1P69891 147 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 HBG2P69892 147 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 BAXQ07812 192 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 BPIFA4PQ86YQ2 179 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 OR5C1Q8NGR4 320 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 PPP1R1CQ8WVI7 109 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 RPUSD4Q96CM3 377 aaKnown RBP10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 ZNF586Q9NXT0 402 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 RFNGQ9Y644 331 aa10.4□□□□□ -0.74
PPP1CA-201ENST00000312989 BOLA2-SMG1P6H3BVE0 249 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 NDUFB4O95168 129 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 AMBPP02760 352 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 TCTAP57738 103 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 KIR3DS1Q14943 382 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 Q6ZRG5 221 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 S100A7AQ86SG5 101 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 THAP6Q8TBB0 222 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 SLC50A1Q9BRV3 221 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 PLA2G2EQ9NZK7 142 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 GOLT1BQ9Y3E0 138 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 TRAV12-2A0A075B6T6 113 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 IGLL5B9A064 214 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 MPDU1O75352 247 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 MPC2O95563 127 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 HIST1H1AQ02539 215 aaPredicted RBP10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 RAB31Q13636 194 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 FAM222AQ5U5X8 452 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 OR1L4Q8NGR5 311 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 FAM167A-AS1Q96KT0 104 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 WDR61Q9GZS3 305 aaKnown RBP10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 TMEM14CQ9P0S9 112 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
PPP1CA-201ENST00000312989 IGHV4-4A0A075B6R2 117 aa10.38□□□□□ -0.75
PPP1CA-201ENST00000312989 LOC102723971A0A1B0GUV8 181 aa10.38□□□□□ -0.75
PPP1CA-201ENST00000312989 TMEM189A5PLL7 270 aa10.38□□□□□ -0.75
PPP1CA-201ENST00000312989 DEFA1P59665 94 aa10.38□□□□□ -0.75
PPP1CA-201ENST00000312989 DEFA3P59666 94 aa10.38□□□□□ -0.75
PPP1CA-201ENST00000312989 CYCSP99999 105 aaKnown RBP10.38□□□□□ -0.75
PPP1CA-201ENST00000312989 PFDN5Q99471 154 aa10.38□□□□□ -0.75
PPP1CA-201ENST00000312989 PARD6GQ9BYG4 376 aaPredicted RBP10.38□□□□□ -0.75
PPP1CA-201ENST00000312989 YTHDF2Q9Y5A9 579 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms