RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 WFDC3Q8IUB2 231 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 FAM24BQ8N5W8 94 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 RNF141Q8WVD5 230 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 MBD3L1Q8WWY6 194 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 SAT2Q96F10 170 aaPredicted RBP9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 C19orf73Q9NVV2 129 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 ZNF586Q9NXT0 402 aa9.44□□□□□ -0.9
CHMP2A-201ENST00000312547 TRAV8-2A0A0B4J237 113 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 OR7C2O60412 319 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 ZNF253O75346 499 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 NDUFB4O95168 129 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 SNRPCP09234 159 aaKnown RBP9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 CD7P09564 240 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 OR10J4P0C629 311 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 NBEAP1P0C6P0 100 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 ODF3L2Q3SX64 289 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 FAM74A1Q5RGS3 127 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 LCN15Q6UWW0 184 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 ALKAL2Q6UX46 152 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 Q8N1Y9 231 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 FAM213BQ8TBF2 198 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 SUN5Q8TC36 379 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 FAM110AQ9BQ89 295 aa9.43□□□□□ -0.9
CHMP2A-201ENST00000312547 MAP1LC3B2A6NCE7 125 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 H3BTX0 84 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 SLC17A3O00476 420 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 ISLRO14498 428 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 CXorf1O96002 111 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 GCHFRP30047 84 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 PSMB3P49720 205 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 UBE2L3P68036 154 aaKnown RBP9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 PDE6HQ13956 83 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 PRR25Q96S07 402 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 MAP1LC3BQ9GZQ8 125 aa9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 ZNF331Q9NQX6 463 aaPredicted RBP9.42□□□□□ -0.9
CHMP2A-201ENST00000312547 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
CHMP2A-201ENST00000312547 CMC4P56277 68 aaPredicted RBP9.41□□□□□ -0.9
CHMP2A-201ENST00000312547 CD81P60033 236 aa9.41□□□□□ -0.9
CHMP2A-201ENST00000312547 TEX261Q6UWH6 196 aa9.41□□□□□ -0.9
CHMP2A-201ENST00000312547 C16orf92Q96LL3 132 aa9.41□□□□□ -0.9
CHMP2A-201ENST00000312547 C20orf173Q96LM9 149 aa9.41□□□□□ -0.9
CHMP2A-201ENST00000312547 SLC50A1Q9BRV3 221 aa9.41□□□□□ -0.9
CHMP2A-201ENST00000312547 MAP6D1Q9H9H5 199 aa9.41□□□□□ -0.9
CHMP2A-201ENST00000312547 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 ZNF688P0C7X2 276 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 ID1P41134 155 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 IGFL4Q6B9Z1 124 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 GTSCR1Q86UQ5 136 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 ZNF680Q8NEM1 530 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 SFT2D1Q8WV19 159 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 BLNKQ8WV28 456 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 TMEM167BQ9NRX6 74 aa9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 AURKAIP1Q9NWT8 199 aaPredicted RBP9.4□□□□□ -0.9
CHMP2A-201ENST00000312547 SORL1Q92673 2214 aa9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 OR11H12B2RN74 326 aa9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 HLA-DMBP28068 263 aa9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 FGF8P55075 233 aaPredicted RBP9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 DEFB131AP59861 70 aa9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 SNRPD3P62318 126 aaKnown RBP9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 PSMG4Q5JS54 123 aa9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 TMPRSS5Q9H3S3 457 aa9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 CLEC5AQ9NY25 188 aa9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 UBQLN2Q9UHD9 624 aa9.39□□□□□ -0.91
CHMP2A-201ENST00000312547 ZNF705EA8MWA4 302 aaPredicted RBP9.38□□□□□ -0.91
CHMP2A-201ENST00000312547 PSG9Q00887 426 aa9.38□□□□□ -0.91
CHMP2A-201ENST00000312547 PSG3Q16557 428 aa9.38□□□□□ -0.91
CHMP2A-201ENST00000312547 LYPD1Q8N2G4 141 aa9.38□□□□□ -0.91
CHMP2A-201ENST00000312547 RNF182Q8N6D2 247 aa9.38□□□□□ -0.91
CHMP2A-201ENST00000312547 LRRC20Q8TCA0 184 aa9.38□□□□□ -0.91
CHMP2A-201ENST00000312547 CITED4Q96RK1 184 aa9.38□□□□□ -0.91
CHMP2A-201ENST00000312547 WFDC10AQ9H1F0 79 aa9.38□□□□□ -0.91
CHMP2A-201ENST00000312547 K7EIL1 84 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 IFNA7P01567 189 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 PRB2P02812 416 aaPredicted RBP9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 CCL20P78556 96 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 IFITM2Q01629 132 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 ZNF124Q15973 351 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 APRG1Q8IVJ8 170 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 EXOC3-AS1Q8N2X6 119 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 DEFB125Q8N687 156 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 LYPD6BQ8NI32 183 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 LINC00052Q96N35 136 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 Q9H3A6 140 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 PRELID1Q9Y255 219 aa9.37□□□□□ -0.91
CHMP2A-201ENST00000312547 A0A1W2PRE2 83 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 A8MZ25 164 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 M0R3E3 92 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 HBE1P02100 147 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 DEFB1P60022 68 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 BLOC1S1P78537 153 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 ICAM4Q14773 271 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 FOXI2Q6ZQN5 318 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 IQCF2Q8IXL9 164 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 ARL2-SNX15V9GYD0 113 aa9.36□□□□□ -0.91
CHMP2A-201ENST00000312547 A0A1B0GV50 99 aa9.35□□□□□ -0.91
CHMP2A-201ENST00000312547 KNCNA6PVL3 124 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 145.8 ms