RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 DNAH2Q9P225 4427 aa14.17□□□□□ -0.14
PDZRN3-202ENST00000308537 IGSF23A1L1A6 192 aa14.17□□□□□ -0.14
PDZRN3-202ENST00000308537 SMIM9A6NGZ8 99 aa14.17□□□□□ -0.14
PDZRN3-202ENST00000308537 GOSR2O14653 212 aa14.17□□□□□ -0.14
PDZRN3-202ENST00000308537 PTTG1O95997 202 aa14.17□□□□□ -0.14
PDZRN3-202ENST00000308537 PXDC1Q5TGL8 231 aa14.17□□□□□ -0.14
PDZRN3-202ENST00000308537 WDR83OSQ9Y284 106 aa14.17□□□□□ -0.14
PDZRN3-202ENST00000308537 TRAV10A0A0B4J240 114 aa14.16□□□□□ -0.14
PDZRN3-202ENST00000308537 LINC00305Q7Z4B0 112 aa14.16□□□□□ -0.14
PDZRN3-202ENST00000308537 STX12Q86Y82 276 aa14.16□□□□□ -0.14
PDZRN3-202ENST00000308537 TMEM252Q8N6L7 170 aa14.16□□□□□ -0.14
PDZRN3-202ENST00000308537 NMES1Q9C002 83 aa14.16□□□□□ -0.14
PDZRN3-202ENST00000308537 IGLL5B9A064 214 aa14.15□□□□□ -0.14
PDZRN3-202ENST00000308537 HBG1P69891 147 aa14.15□□□□□ -0.14
PDZRN3-202ENST00000308537 HBG2P69892 147 aa14.15□□□□□ -0.14
PDZRN3-202ENST00000308537 FGL1Q08830 312 aa14.15□□□□□ -0.14
PDZRN3-202ENST00000308537 RAB31Q13636 194 aa14.15□□□□□ -0.14
PDZRN3-202ENST00000308537 IGF2BP2-AS1Q96M15 143 aa14.15□□□□□ -0.14
PDZRN3-202ENST00000308537 IGHV3OR16-12A0A075B7B8 117 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 PRB4P10163 310 aaPredicted RBP14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 CAMLGP49069 296 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 SULT1A1P50225 295 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 OPCMLQ14982 345 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 PSG3Q16557 428 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 MIC13Q5XKP0 118 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 DKK2Q9UBU2 259 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 RNF24Q9Y225 148 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 RFNGQ9Y644 331 aa14.14□□□□□ -0.15
PDZRN3-202ENST00000308537 FAT2Q9NYQ8 4349 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 IGHV4-4A0A075B6R2 117 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 M0R2Z0 102 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 SLC17A3O00476 420 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 AMBPP02760 352 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 IGLC2P0DOY2 106 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 S100A11P31949 105 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 SPINK13Q1W4C9 94 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 OR8A1Q8NGG7 326 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 CHAC2Q8WUX2 184 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 RNF126Q9BV68 326 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 ZNF331Q9NQX6 463 aaPredicted RBP14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 UQCC1Q9NVA1 299 aa14.13□□□□□ -0.15
PDZRN3-202ENST00000308537 TMEM189A5PLL7 270 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 E5RGE8 158 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 H0YIZ8 118 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 DUSP14O95147 198 aaKnown RBP14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 SIX6O95475 246 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 PRM2P04554 102 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 SNRPCP09234 159 aaKnown RBP14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 PET100P0DJ07 73 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 SAT2Q96F10 170 aaPredicted RBP14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 SLC25A31Q9H0C2 315 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 PLA2G2EQ9NZK7 142 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 GOLT1BQ9Y3E0 138 aa14.12□□□□□ -0.15
PDZRN3-202ENST00000308537 DEFB131BA0A096LNP1 70 aa14.11□□□□□ -0.15
PDZRN3-202ENST00000308537 H3BQ15 152 aa14.11□□□□□ -0.15
PDZRN3-202ENST00000308537 CXCL2P19875 107 aa14.11□□□□□ -0.15
PDZRN3-202ENST00000308537 RPL29P47914 159 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-202ENST00000308537 ATP6V1FQ16864 119 aa14.11□□□□□ -0.15
PDZRN3-202ENST00000308537 FAM222AQ5U5X8 452 aa14.11□□□□□ -0.15
PDZRN3-202ENST00000308537 ZNF738Q8NE65 137 aa14.11□□□□□ -0.15
PDZRN3-202ENST00000308537 HECTD4Q9Y4D8 3996 aa14.11□□□□□ -0.15
PDZRN3-202ENST00000308537 DNAH17Q9UFH2 4485 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 TRAV5A0A0B4J249 113 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 COX7A2P2O60397 106 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 SPART-AS1P0CW21 52 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 EMP1P54849 157 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 C10orf113Q5VZT2 155 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 LCN15Q6UWW0 184 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 BAP18Q8IXM2 172 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 DNAJC4Q9NNZ3 241 aa14.1□□□□□ -0.15
PDZRN3-202ENST00000308537 UBE2L5PA0A1B0GUS4 154 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 LOC102723971A0A1B0GUV8 181 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 PLAC8L1A1L4L8 177 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 PRAC2D3DTV9 90 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 H3BTX0 84 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 HBE1P02100 147 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 LRRC37A5PQ49AS3 106 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 BPIFA4PQ86YQ2 179 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 RPUSD4Q96CM3 377 aaKnown RBP14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 SLC39A9Q9NUM3 307 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 OR5AC2Q9NZP5 309 aa14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 YTHDF2Q9Y5A9 579 aaKnown RBP14.09□□□□□ -0.15
PDZRN3-202ENST00000308537 TRAV12-2A0A075B6T6 113 aa14.08□□□□□ -0.16
PDZRN3-202ENST00000308537 BOLA2-SMG1P6H3BVE0 249 aa14.08□□□□□ -0.16
PDZRN3-202ENST00000308537 H2BFSP57053 126 aa14.08□□□□□ -0.16
PDZRN3-202ENST00000308537 HIST1H1AQ02539 215 aaPredicted RBP14.08□□□□□ -0.16
PDZRN3-202ENST00000308537 NHLH2Q02577 135 aa14.08□□□□□ -0.16
PDZRN3-202ENST00000308537 OXA1LQ15070 435 aa14.08□□□□□ -0.16
PDZRN3-202ENST00000308537 RRN3P1Q2M238 152 aa14.08□□□□□ -0.16
PDZRN3-202ENST00000308537 SLC50A1Q9BRV3 221 aa14.08□□□□□ -0.16
PDZRN3-202ENST00000308537 B2MP61769 119 aa14.07□□□□□ -0.16
PDZRN3-202ENST00000308537 KIR3DS1Q14943 382 aa14.07□□□□□ -0.16
PDZRN3-202ENST00000308537 PPP1R1CQ8WVI7 109 aa14.07□□□□□ -0.16
PDZRN3-202ENST00000308537 ZNF586Q9NXT0 402 aa14.07□□□□□ -0.16
PDZRN3-202ENST00000308537 PXMP4Q9Y6I8 212 aa14.07□□□□□ -0.16
PDZRN3-202ENST00000308537 ZNF705GA8MUZ8 300 aaPredicted RBP14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 INSP01308 110 aa14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 AZU1P20160 251 aa14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 BAXQ07812 192 aa14.06□□□□□ -0.16
PDZRN3-202ENST00000308537 RGS21Q2M5E4 152 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms