RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 HELTA6NFD8 242 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 HAX1O00165 279 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 AWAT1Q58HT5 328 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 CMTM2Q8TAZ6 248 aa13.4□□□□□ -0.26
KRT28-201ENST00000306658 IGHV7-4-1A0A0J9YVY3 117 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 LGALS9O00182 355 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 PEX7O00628 323 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 ZNF253O75346 499 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 SCO1O75880 301 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 HOXD3P31249 432 aaPredicted RBP13.39□□□□□ -0.27
KRT28-201ENST00000306658 BMI1P35226 326 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 RPL35P42766 123 aaKnown RBP13.39□□□□□ -0.27
KRT28-201ENST00000306658 RHEBQ15382 184 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 TM4SF20Q53R12 229 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 SIGLEC15Q6ZMC9 328 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 REC114Q7Z4M0 266 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 KLHL30-AS1Q8NEE0 82 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 C2CD4CQ8TF44 421 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 DPF1Q92782 380 aa13.39□□□□□ -0.27
KRT28-201ENST00000306658 LINC01619G3V211 115 aa13.38□□□□□ -0.27
KRT28-201ENST00000306658 SLC17A3O00476 420 aa13.38□□□□□ -0.27
KRT28-201ENST00000306658 AKR1C3P42330 323 aa13.38□□□□□ -0.27
KRT28-201ENST00000306658 CNN1P51911 297 aaKnown RBP13.38□□□□□ -0.27
KRT28-201ENST00000306658 C18orf65Q6ZTR6 163 aa13.38□□□□□ -0.27
KRT28-201ENST00000306658 EXOC3-AS1Q8N2X6 119 aa13.38□□□□□ -0.27
KRT28-201ENST00000306658 GLMPQ8WWB7 406 aa13.38□□□□□ -0.27
KRT28-201ENST00000306658 ATG101Q9BSB4 218 aa13.38□□□□□ -0.27
KRT28-201ENST00000306658 SETD2Q9BYW2 2564 aaPredicted RBP13.38□□□□□ -0.27
KRT28-201ENST00000306658 C7orf77A4D0Y5 90 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 B4DEV8 164 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 CD28P10747 220 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 C1QL4Q86Z23 238 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 OR11H1Q8NG94 326 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 OR1N2Q8NGR9 330 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 RHPN1-AS1Q9BWJ2 59 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 RPS10P5Q9NQ39 176 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 SMPXQ9UHP9 88 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 TSSC4Q9Y5U2 329 aaPredicted RBP13.37□□□□□ -0.27
KRT28-201ENST00000306658 A8MWP6 167 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 C9JCJ5 164 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 SYNJ2BPP57105 145 aa13.37□□□□□ -0.27
KRT28-201ENST00000306658 KLF5Q13887 457 aaPredicted RBP13.37□□□□□ -0.27
KRT28-201ENST00000306658 TCRAP04437 139 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 S100A9P06702 114 aaKnown RBP13.36□□□□□ -0.27
KRT28-201ENST00000306658 PROK1P58294 105 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 TAS2R60P59551 318 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 GNG5P63218 68 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 ADIRFQ15847 76 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 DEFB136Q30KP8 78 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 C11orf44Q8N8P7 122 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 SLC50A1Q9BRV3 221 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 RPH3ALQ9UNE2 315 aa13.36□□□□□ -0.27
KRT28-201ENST00000306658 A0A1B0GUS0 222 aa13.35□□□□□ -0.27
KRT28-201ENST00000306658 CHEK1O14757 476 aa13.35□□□□□ -0.27
KRT28-201ENST00000306658 CSN1S1P47710 185 aa13.35□□□□□ -0.27
KRT28-201ENST00000306658 GNG4P50150 75 aa13.35□□□□□ -0.27
KRT28-201ENST00000306658 RPL23P62829 140 aaKnown RBP13.35□□□□□ -0.27
KRT28-201ENST00000306658 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.35□□□□□ -0.27
KRT28-201ENST00000306658 ARL6IP6Q8N6S5 226 aa13.35□□□□□ -0.27
KRT28-201ENST00000306658 ZNF331Q9NQX6 463 aaPredicted RBP13.35□□□□□ -0.27
KRT28-201ENST00000306658 LY96Q9Y6Y9 160 aa13.35□□□□□ -0.27
KRT28-201ENST00000306658 TRBV20OR9-2A0A075B6H5 130 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 TMEM213A2RRL7 107 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 CYSRT1A8MQ03 144 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 K7EQM0 130 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 UBE2G1P62253 170 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 BTN1A1Q13410 526 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 CITED2Q99967 270 aaPredicted RBP13.34□□□□□ -0.27
KRT28-201ENST00000306658 KLF12Q9Y4X4 402 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 TMEM183BQ1AE95 376 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 C8orf86Q6ZUL3 223 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 LINC01551Q86U37 167 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 PRELID1Q9Y255 219 aa13.34□□□□□ -0.27
KRT28-201ENST00000306658 C2CD3Q4AC94 2353 aa13.33□□□□□ -0.28
KRT28-201ENST00000306658 A0A087WWC5 75 aa13.33□□□□□ -0.28
KRT28-201ENST00000306658 SLURP1P55000 103 aa13.33□□□□□ -0.28
KRT28-201ENST00000306658 RPL11P62913 178 aaKnown RBP13.33□□□□□ -0.28
KRT28-201ENST00000306658 SRSF2Q01130 221 aaKnown RBP13.33□□□□□ -0.28
KRT28-201ENST00000306658 OCC1Q8TAD7 63 aa13.33□□□□□ -0.28
KRT28-201ENST00000306658 FMC1Q96HJ9 113 aa13.33□□□□□ -0.28
KRT28-201ENST00000306658 LINC00479Q96M42 142 aa13.33□□□□□ -0.28
KRT28-201ENST00000306658 CLEC5AQ9NY25 188 aa13.33□□□□□ -0.28
KRT28-201ENST00000306658 PEMTQ9UBM1 199 aa13.33□□□□□ -0.28
KRT28-201ENST00000306658 SERTM2A0A1B0GWG4 89 aa13.32□□□□□ -0.28
KRT28-201ENST00000306658 A0A1W2PRX2 142 aa13.32□□□□□ -0.28
KRT28-201ENST00000306658 TRAV34A0A0B4J273 112 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 PGPEP1LA6NFU8 196 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 DIRC3C9JPN6 131 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 M0QZ24 198 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 M0R3E3 92 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 ISLRO14498 428 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 MT-ND4LP03901 98 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 CBLN1P23435 193 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 GOLT1AQ6ZVE7 132 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 DUX3Q96PT4 197 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 NRN1Q9NPD7 142 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 C2orf70A6NJV1 201 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 HIST2H2BDQ6DRA6 164 aa13.31□□□□□ -0.28
KRT28-201ENST00000306658 BAGE2Q86Y30 109 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms