RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 QRFPP83859 136 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 NEGR1Q7Z3B1 354 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TIMM21Q9BVV7 248 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GTSF1LQ9H1H1 148 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 G3V318 75 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 SYS1-DBNDD2H3BUS1 97 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 LEPROTO15243 131 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 C9orf139Q6ZV77 190 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 Q86TA4 180 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 LINC01356Q8N9X3 169 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ALPK2Q86TB3 2170 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 SSC4DQ8WTU2 575 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 IGFBPL1Q8WX77 278 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 PLEKHB2Q96CS7 222 aa10.98□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ESDP10768 282 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 SEC11AP67812 179 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 M0R1W7 72 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 PRIMA1Q86XR5 153 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 FREM3P0C091 2139 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TRBV24-1A0A075B6N3 115 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GATA4P43694 442 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 GBF1Q92538 1859 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 FAM223BA6NKX1 122 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 WISP1O95388 367 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 LGALS1P09382 135 aaKnown RBP10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 KIF26BQ2KJY2 2108 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 FAM223AQ8IWN6 122 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 SPOCK3Q9BQ16 436 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 WDR90Q96KV7 1748 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 A0A1W2PPI3 338 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ZFAND6Q6FIF0 208 aa10.97□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ZC2HC1BQ5TFG8 222 aa10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 NDUFS6O75380 124 aaKnown RBP10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TMEM242Q9NWH2 141 aa10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 PFN2P35080 140 aa10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 SP5Q6BEB4 398 aaPredicted RBP10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 ZNF114Q8NC26 417 aa10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 CYYR1Q96J86 154 aa10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 Q96MF0 132 aa10.96□□□□□ -0.65
CHRFAM7A-201ENST00000299847 F5H768 121 aa10.96□□□□□ -0.66
CHRFAM7A-201ENST00000299847 C3orf56Q8N813 242 aa10.96□□□□□ -0.66
CHRFAM7A-201ENST00000299847 SMPXQ9UHP9 88 aa10.96□□□□□ -0.66
CHRFAM7A-201ENST00000299847 VWC2LB2RUY7 222 aa10.96□□□□□ -0.66
CHRFAM7A-201ENST00000299847 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 CLPSL2Q6UWE3 100 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 CHAC1Q9BUX1 264 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 GHRHP01286 108 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 GAGE2BQ13066 116 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 SS18Q15532 418 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 F8WEM9 126 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 C9JAW5 83 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 NDUFB8O95169 186 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 FAM110DQ8TAY7 271 aaPredicted RBP10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 TP53TG1Q9Y2A0 90 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 C1orf194Q5T5A4 169 aa10.95□□□□□ -0.66
CHRFAM7A-201ENST00000299847 LIME1Q9H400 295 aa10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 YLPM1P49750 1951 aaKnown RBP10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 PAX9P55771 341 aa10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 LTBP1Q14766 1721 aa10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 MBD3L4A6NDZ8 208 aaPredicted RBP10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 MBD3L3A6NE82 208 aaPredicted RBP10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 MBD3L5A6NJ08 208 aaPredicted RBP10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 MBD3L2Q8NHZ7 208 aaPredicted RBP10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 DAZ1Q9NQZ3 744 aaKnown RBP10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 TCF15Q12870 199 aa10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 USMG5Q96IX5 58 aa10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 PYY3Q5JQD4 70 aa10.94□□□□□ -0.66
CHRFAM7A-201ENST00000299847 IGKV1-6A0A0C4DH72 117 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 GAGE12BA1L429 117 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 GAGE7O76087 117 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 GAGE12FP0CL80 117 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 GAGE12GP0CL81 117 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 GAGE12IP0CL82 117 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 TPSG1Q9NRR2 321 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 SHANK2-AS3Q9BTD1 123 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 TRAV1-1A0A0B4J248 108 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 ZNF664Q8N3J9 261 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 DLX4Q92988 240 aaPredicted RBP10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 SDK2Q58EX2 2172 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 NXPH4O95158 308 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 FAM120AOSQ5T036 256 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 ADAMTSL5Q6ZMM2 481 aa10.93□□□□□ -0.66
CHRFAM7A-201ENST00000299847 MYMXA0A1B0GTQ4 84 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 GAGE6Q13070 117 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 PMVKQ15126 192 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 A0A1B0GW64 132 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 TEX36Q5VZQ5 186 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 SUMO4Q6EEV6 95 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 ANAPC10Q9UM13 185 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 C9JQL5 133 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 APC2O95996 2303 aa10.92□□□□□ -0.66
CHRFAM7A-201ENST00000299847 DIAPH2-AS1Q14236 149 aa10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 ZNF124Q15973 351 aa10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 AZU1P20160 251 aa10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 C17orf82Q86X59 251 aaPredicted RBP10.91□□□□□ -0.66
CHRFAM7A-201ENST00000299847 RNF166Q96A37 237 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms