RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
SSRP1-202ENST00000293880 LRRC37A2A6NM11 1700 aa13.13□□□□□ -0.31
SSRP1-202ENST00000293880 ABCA7Q8IZY2 2146 aa13.13□□□□□ -0.31
SSRP1-202ENST00000293880 GAFA1Q96PS6 74 aa13.13□□□□□ -0.31
SSRP1-202ENST00000293880 RUSC1-AS1Q66K80 236 aa13.13□□□□□ -0.31
SSRP1-202ENST00000293880 MRPS18CQ9Y3D5 142 aaKnown RBP13.12□□□□□ -0.31
SSRP1-202ENST00000293880 SCN10AQ9Y5Y9 1956 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 H3BMG7 143 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 DEFB130BP0DP73 79 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 DEFB130AP0DP74 79 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 CRYBA4P53673 196 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 C20orf204Q6ZNR8 217 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 IL17RELQ6ZVW7 336 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 DNAJC30Q96LL9 226 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 NEGR1Q7Z3B1 354 aa13.12□□□□□ -0.31
SSRP1-202ENST00000293880 A0A1B0GWJ7 208 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 HEATR5BQ9P2D3 2071 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 PNRC2Q9NPJ4 139 aaKnown RBP13.11□□□□□ -0.31
SSRP1-202ENST00000293880 IGHV3-38A0A0C4DH36 116 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 H3BUX3 64 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 AMTNQ6UX39 209 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 PRIMA1Q86XR5 153 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 LOC102723996A0A087X1L8 192 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 C9orf118A6NHY6 69 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 VCYO14598 125 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 ARMS2P0C7Q2 107 aa13.11□□□□□ -0.31
SSRP1-202ENST00000293880 RPL36AP83881 106 aaKnown RBP13.11□□□□□ -0.31
SSRP1-202ENST00000293880 RPL36ALQ969Q0 106 aaKnown RBP13.11□□□□□ -0.31
SSRP1-202ENST00000293880 SPTBN2O15020 2390 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 AHCTF1Q8WYP5 2266 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 LINC01549A6NIU2 74 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 TRGV9Q99603 122 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 ICE1Q9Y2F5 2266 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 KLHL30-AS1Q8NEE0 82 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 TMEM178BH3BS89 294 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 BUB1B-PAK6H3BSN5 160 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 CLPSP04118 112 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 Q86TA4 180 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 Q0VFX4 171 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 NCOR1P1Q9H4R4 102 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 A0A1B0GW64 132 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 ZNF883P0CG24 379 aa13.1□□□□□ -0.31
SSRP1-202ENST00000293880 LHFPL1Q86WI0 220 aa13.09□□□□□ -0.31
SSRP1-202ENST00000293880 PFN2P35080 140 aa13.09□□□□□ -0.31
SSRP1-202ENST00000293880 TP53TG1Q9Y2A0 90 aa13.09□□□□□ -0.31
SSRP1-202ENST00000293880 BRCA1P38398 1863 aaKnown RBP13.09□□□□□ -0.31
SSRP1-202ENST00000293880 PPDPFLQ8WWR9 84 aa13.09□□□□□ -0.31
SSRP1-202ENST00000293880 CYYR1Q96J86 154 aa13.09□□□□□ -0.31
SSRP1-202ENST00000293880 COL8A2P25067 703 aa13.09□□□□□ -0.31
SSRP1-202ENST00000293880 C15orf62A8K5M9 175 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 GAGE7O76087 117 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 GAGE12FP0CL80 117 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 GAGE12GP0CL81 117 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 GAGE12IP0CL82 117 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 C1QTNF4Q9BXJ3 329 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 TRBV7-1A0A0A6YYK4 115 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 MYMXA0A1B0GTQ4 84 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 TMEM258P61165 79 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 MAPK1IP1LQ8NDC0 245 aa13.08□□□□□ -0.32
SSRP1-202ENST00000293880 RALGAPA2Q2PPJ7 1873 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 FGF6P10767 208 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 CFHR1Q03591 330 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 Q6P435 159 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 SPSB3Q6PJ21 355 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 hADV29S1A0JD25 119 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 E9PLN8 166 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 NDUFS5O43920 106 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 FBLN5Q9UBX5 448 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 WIPF3A6NGB9 483 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 IGKV1-16P04430 117 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 SLAQ13239 276 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 RNASE13Q5GAN3 156 aaKnown RBP13.07□□□□□ -0.32
SSRP1-202ENST00000293880 K7EP34 96 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 SLC25A16P16260 332 aa13.07□□□□□ -0.32
SSRP1-202ENST00000293880 GNLYP22749 145 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 C15orf53Q8NAA6 179 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 C9JQL5 133 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 TMEM14EPQ6UXP3 125 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 IGKV1D-17A0A075B6S4 117 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 A0A096LPF7 62 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 A0A0G2JNJ9 132 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 Q9UFV3 132 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 SYNJ2BPP57105 145 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 SS18Q15532 418 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 SPACA3Q8IXA5 215 aa13.06□□□□□ -0.32
SSRP1-202ENST00000293880 IL18BPO95998 194 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 TRPM7Q96QT4 1865 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 SSC4DQ8WTU2 575 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 ZNF318Q5VUA4 2279 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 CACNA1EQ15878 2313 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 RHPN1-AS1Q9BWJ2 59 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 FAM166AQ6J272 317 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 CLPSL2Q6UWE3 100 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 UBL5Q9BZL1 73 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 Q6ZRM9 215 aa13.05□□□□□ -0.32
SSRP1-202ENST00000293880 GBF1Q92538 1859 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms