RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TXNDC17Q9BRA2 123 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 ZNF256Q9Y2P7 627 aaPredicted RBP3.86□□□□□ -1.79
UBR1-201ENST00000290650 FAM120AOSQ5T036 256 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 FMC1Q96HJ9 113 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 CTSZQ9UBR2 303 aa3.86□□□□□ -1.79
UBR1-201ENST00000290650 H3BUX3 64 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 IGLV2-14P01704 120 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 MORN5Q5VZ52 161 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 Q71RC1 249 aaPredicted RBP3.85□□□□□ -1.79
UBR1-201ENST00000290650 OR10AG1Q8NH19 301 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 C8orf46Q8TAG6 207 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 COL25A1Q9BXS0 654 aaPredicted RBP3.85□□□□□ -1.79
UBR1-201ENST00000290650 TMEM14BQ9NUH8 114 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 E7EUB6 86 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 IL17RELQ6ZVW7 336 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 PIP4P1Q86T03 277 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 FER1L6-AS1Q8NA97 138 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 NEU4Q8WWR8 484 aaPredicted RBP3.85□□□□□ -1.79
UBR1-201ENST00000290650 FOXC2Q99958 501 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 C19orf24Q9BVV8 132 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 SLC25A2Q9BXI2 301 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 LOC107984156A0A0G2JMH3 177 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 HLA-DMBP28068 263 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 RIPPLY3P57055 190 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 Q6ZS49 121 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 ARL17AQ8IVW1 177 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 UQCR10Q9UDW1 63 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 TRAV30A0A087WSZ9 112 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 GGTLC3B5MD39 225 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 K7ENP7 123 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 LMO1P25800 156 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 ZNF48Q96MX3 618 aaPredicted RBP3.85□□□□□ -1.79
UBR1-201ENST00000290650 TMEM70Q9BUB7 260 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 ZNF257Q9Y2Q1 563 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 PFN1P07737 140 aaKnown RBP3.85□□□□□ -1.79
UBR1-201ENST00000290650 ID1P41134 155 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 LEPP41159 167 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 NUP37Q8NFH4 326 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 BEX4Q9NWD9 120 aaPredicted RBP3.85□□□□□ -1.79
UBR1-201ENST00000290650 ZFP30Q9Y2G7 519 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 IGLV1-44P01699 117 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 LOXP28300 417 aaPredicted RBP3.85□□□□□ -1.79
UBR1-201ENST00000290650 RNF138Q8WVD3 245 aa3.85□□□□□ -1.79
UBR1-201ENST00000290650 NBEAQ8NFP9 2946 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 A0A1B0GW15 77 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 D6R8Y8 96 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 ZNF324O75467 553 aaPredicted RBP3.84□□□□□ -1.79
UBR1-201ENST00000290650 CA7P43166 264 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 ACTL10Q5JWF8 245 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 FAM159AQ6UWV7 190 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 MYO9AB2RTY4 2548 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 MAP1AP78559 2803 aaPredicted RBP3.84□□□□□ -1.79
UBR1-201ENST00000290650 GAGE10A6NGK3 116 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 CD7P09564 240 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 FRMD6-AS1P0C7T7 363 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 HIST2H2BDQ6DRA6 164 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 HIST1H4GQ99525 98 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 C2CD3Q4AC94 2353 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 FAM106AQ4KMX7 169 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 LYZL1Q6UWQ5 148 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 OTORQ9NRC9 128 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 TRAV1-1A0A0B4J248 108 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 K7EN84 100 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 VDAC2P45880 294 aaPredicted RBP3.84□□□□□ -1.79
UBR1-201ENST00000290650 NUTF2P61970 127 aaKnown RBP3.84□□□□□ -1.79
UBR1-201ENST00000290650 SLC25A34Q6PIV7 304 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 ZNF414Q96IQ9 312 aa3.84□□□□□ -1.79
UBR1-201ENST00000290650 ZNF688P0C7X2 276 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 CFHR2P36980 270 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 C5orf64Q2M2E5 130 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 TMEM249Q2WGJ8 235 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 AMN1Q8IY45 258 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 SNHG12Q9BXW3 62 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 A0A1W2PRE2 83 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 TMEM213A2RRL7 107 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 PRSS2P07478 247 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 LINC00614P0C842 121 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 CACNG7P62955 275 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 Q8TCH9 128 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 JMJD8Q96S16 334 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 C2orf88Q9BSF0 95 aa3.84□□□□□ -1.8
UBR1-201ENST00000290650 ALKBH7Q9BT30 221 aaPredicted RBP3.84□□□□□ -1.8
UBR1-201ENST00000290650 ATP6V0E1O15342 81 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 FCN3O75636 299 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 COX19Q49B96 90 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TMEM170BQ5T4T1 132 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 FNDC4Q9H6D8 234 aaPredicted RBP3.83□□□□□ -1.8
UBR1-201ENST00000290650 NDUFA4L2Q9NRX3 87 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 LOC400499M0QZD8 3231 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 A0A1W2PS18 150 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 A8MWP6 167 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 C22orf46C9J442 243 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 NDUFB8O95169 186 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 ARMS2P0C7Q2 107 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 TMEM167AQ8TBQ9 72 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 VCX2Q9H322 139 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 A0A0U1RRA0 63 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 SHISA9B4DS77 424 aa3.83□□□□□ -1.8
UBR1-201ENST00000290650 NPC2P61916 151 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms