RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SAA2-SAA4A0A096LPE2 208 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 FABP5P3A8MUU1 101 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 SAA2P0DJI9 122 aaPredicted RBP9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 FBXL19-AS1Q494R0 122 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 LCNL1Q6ZST4 164 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 VMO1Q7Z5L0 202 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 SPAG8Q99932 426 aaPredicted RBP9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 MRPL20Q9BYC9 149 aaKnown RBP9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 LIME1Q9H400 295 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 PNRC2Q9NPJ4 139 aaKnown RBP9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 ERG28Q9UKR5 140 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 IGHV3OR16-8A0A075B7F1 116 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 IGLC7A0M8Q6 106 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 CCL3L1P16619 93 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 PRCDQ00LT1 54 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 HAPLN4Q86UW8 402 aa9.24□□□□□ -0.93
NPC1L1-201ENST00000289547 EEF1AKMT3Q96AZ1 226 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 C1orf147Q96MC9 270 aaPredicted RBP9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 ANAPC10Q9UM13 185 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 IGHV3-49A0A0A0MS15 119 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 YPEL1O60688 119 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 SLAQ13239 276 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 COPS9Q8WXC6 57 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 RCHY1Q96PM5 261 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 YPEL2Q96QA6 119 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 FBXL15Q9H469 300 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 NUPR1O60356 82 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 PLA2G2EQ9NZK7 142 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 RPUSD1Q9UJJ7 312 aaKnown RBP9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 SAP30O75446 220 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 PPP1R17O96001 155 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 SCRT1Q9BWW7 348 aa9.23□□□□□ -0.93
NPC1L1-201ENST00000289547 TRAV3A0A0B4J244 114 aa9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 FAM90A9PA6NNJ1 464 aa9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 WNT2P09544 360 aa9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 PLAURQ03405 335 aa9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 Q8TCH9 128 aa9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 PYGO2Q9BRQ0 406 aa9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 WIPF3A6NGB9 483 aa9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 COX8AP10176 69 aa9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 GRNP28799 593 aaKnown RBP9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 IFI27P40305 119 aaPredicted RBP9.22□□□□□ -0.93
NPC1L1-201ENST00000289547 A0A1W2PPM0 123 aa9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 TCRAP04437 139 aa9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 GATA4P43694 442 aa9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 LINC00205P59089 165 aa9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 SUMO2P61956 95 aaKnown RBP9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 PRSS57Q6UWY2 283 aa9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 RPL15P61313 204 aaKnown RBP9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 LYZL1Q6UWQ5 148 aa9.21□□□□□ -0.93
NPC1L1-201ENST00000289547 IGHV3-66A0A0C4DH42 116 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 NPIPB5A8MRT5 1133 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 IGHV3-23P01764 117 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 EXOC3-AS1Q8N2X6 119 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 V9GYV3 84 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 FER1L5A0AVI2 2057 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 TRGV3P03979 118 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 CD24P25063 80 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 ASIPP42127 132 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 VWC2Q2TAL6 325 aa9.21□□□□□ -0.94
NPC1L1-201ENST00000289547 TMEM131Q92545 1883 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 NPFFO15130 113 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 LY6HO94772 140 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 NPPCP23582 126 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 FAM159AQ6UWV7 190 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 PPP1R27Q86WC6 154 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 DEFB125Q8N687 156 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 F8W1H4 67 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 LINC01559Q495D7 138 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 COL5A1P20908 1838 aaPredicted RBP9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 ZNF106Q9H2Y7 1883 aaKnown RBP9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 PSMB11A5LHX3 300 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 SHISA9B4DS77 424 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 NBR2O15453 112 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 CR1LQ2VPA4 569 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 ORMDL2Q53FV1 153 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 IGLV3-9A0A075B6K5 115 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 PSPNO60542 156 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 C3orf56Q8N813 242 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 MOB4Q9Y3A3 225 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 KLF12Q9Y4X4 402 aa9.2□□□□□ -0.94
NPC1L1-201ENST00000289547 LINC00473A8K010 186 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 C9JAW5 83 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 IGHV1-8P0DP01 117 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 C10orf55Q5SWW7 151 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 Q6ZS49 121 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 AMN1Q8IY45 258 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 IGKV1-6A0A0C4DH72 117 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 MLNRO43193 412 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 TMEM42Q69YG0 159 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 EBLN2Q6P2I7 272 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 ARPC1AQ92747 370 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 GAFA1Q96PS6 74 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 SMKR1H3BMG3 65 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 TMEM200BQ69YZ2 307 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 C8orf46Q8TAG6 207 aa9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 MBNL3Q9NUK0 354 aaKnown RBP9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 SPTAN1Q13813 2472 aaKnown RBP9.19□□□□□ -0.94
NPC1L1-201ENST00000289547 IGHV1-24A0A0C4DH33 117 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms