RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 TM4SF20Q53R12 229 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 GPR61Q9BZJ8 451 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
NCK1-201ENST00000288986 F6UZH7 168 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 NPPCP23582 126 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 INSL3P51460 131 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 UBE2L3P68036 154 aaKnown RBP11.68□□□□□ -0.54
NCK1-201ENST00000288986 SAMD5Q5TGI4 173 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 CST9LP1Q5W188 147 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 CLRN3Q8NCR9 226 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 TMEM190Q8WZ59 177 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 UFC1Q9Y3C8 167 aa11.68□□□□□ -0.54
NCK1-201ENST00000288986 SCO1O75880 301 aa11.67□□□□□ -0.54
NCK1-201ENST00000288986 CSN3P07498 182 aa11.67□□□□□ -0.54
NCK1-201ENST00000288986 TOMM20LQ6UXN7 152 aa11.67□□□□□ -0.54
NCK1-201ENST00000288986 S100A7AQ86SG5 101 aa11.67□□□□□ -0.54
NCK1-201ENST00000288986 C11orf52Q96A22 123 aa11.67□□□□□ -0.54
NCK1-201ENST00000288986 NKX6-2Q9C056 277 aaPredicted RBP11.67□□□□□ -0.54
NCK1-201ENST00000288986 NOTCH1P46531 2555 aa11.67□□□□□ -0.54
NCK1-201ENST00000288986 C2orf70A6NJV1 201 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 A8MWP6 167 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 ZNF207O43670 478 aaKnown RBP11.66□□□□□ -0.54
NCK1-201ENST00000288986 FOLR2P14207 255 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 EDN2P20800 178 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 DAZ1Q9NQZ3 744 aaKnown RBP11.66□□□□□ -0.54
NCK1-201ENST00000288986 TMEM213A2RRL7 107 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 ZNF98A6NK75 572 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 H3BQ15 152 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 MRPS12O15235 138 aaKnown RBP11.66□□□□□ -0.54
NCK1-201ENST00000288986 CBLN1P23435 193 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 FAM74A3Q4VXF1 159 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 LEMD1Q68G75 181 aa11.66□□□□□ -0.54
NCK1-201ENST00000288986 GGTLC3B5MD39 225 aa11.65□□□□□ -0.54
NCK1-201ENST00000288986 CEBPGP53567 150 aa11.65□□□□□ -0.54
NCK1-201ENST00000288986 PARLQ9H300 379 aa11.65□□□□□ -0.54
NCK1-201ENST00000288986 NBEAP1P0C6P0 100 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 NIPSNAP3BQ9BS92 247 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 SIGLEC8Q9NYZ4 499 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 RNF24Q9Y225 148 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 K7EMT4 169 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 HIST1H1EP10412 219 aaKnown RBP11.64□□□□□ -0.55
NCK1-201ENST00000288986 ADAMTSL5Q6ZMM2 481 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 DYNLRB2Q8TF09 96 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 SDF2L1Q9HCN8 221 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 RABAC1Q9UI14 185 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 SELENOKQ9Y6D0 94 aa11.64□□□□□ -0.55
NCK1-201ENST00000288986 SCO2A0A1W2PP80 73 aa11.63□□□□□ -0.55
NCK1-201ENST00000288986 ZNF727A8MUV8 499 aa11.63□□□□□ -0.55
NCK1-201ENST00000288986 WIPF1O43516 503 aa11.63□□□□□ -0.55
NCK1-201ENST00000288986 IGLC2P0DOY2 106 aa11.63□□□□□ -0.55
NCK1-201ENST00000288986 TVP23CQ96ET8 276 aa11.63□□□□□ -0.55
NCK1-201ENST00000288986 SMIM7Q9BQ49 75 aa11.63□□□□□ -0.55
NCK1-201ENST00000288986 IGHV3-49A0A0A0MS15 119 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 IGLV1-51P01701 117 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 S100A7P31151 101 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 SUMO1P63165 101 aaKnown RBP11.62□□□□□ -0.55
NCK1-201ENST00000288986 PNRC1Q12796 327 aaPredicted RBP11.62□□□□□ -0.55
NCK1-201ENST00000288986 RPUSD4Q96CM3 377 aaKnown RBP11.62□□□□□ -0.55
NCK1-201ENST00000288986 TCEAL7Q9BRU2 100 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 ZNF586Q9NXT0 402 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 U3KQE9 123 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 IGHV3OR16-13A0A075B7E8 117 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 IGHV3-74A0A0B4J1X5 117 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 NDUFB4O95168 129 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 RHEBQ15382 184 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 BEAN1Q3B7T3 259 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
NCK1-201ENST00000288986 C7orf77A4D0Y5 90 aa11.61□□□□□ -0.55
NCK1-201ENST00000288986 CRYBB3P26998 211 aa11.61□□□□□ -0.55
NCK1-201ENST00000288986 C2CD4CQ8TF44 421 aa11.61□□□□□ -0.55
NCK1-201ENST00000288986 METTL26Q96S19 204 aa11.61□□□□□ -0.55
NCK1-201ENST00000288986 ZMAT5Q9UDW3 170 aaKnown RBP11.61□□□□□ -0.55
NCK1-201ENST00000288986 MLXQ9UH92 298 aa11.61□□□□□ -0.55
NCK1-201ENST00000288986 TRBV19A0A075B6N1 114 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 IGHV7-4-1A0A0J9YVY3 117 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 DNASE2O00115 360 aaPredicted RBP11.6□□□□□ -0.55
NCK1-201ENST00000288986 BUB3O43684 328 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 KRTAP10-11P60412 298 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 EGFEM1PQ0D2K5 195 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 TMEM241Q24JQ0 296 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 DEFB114Q30KQ6 69 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 CD300EQ496F6 205 aaPredicted RBP11.6□□□□□ -0.55
NCK1-201ENST00000288986 DERL1Q9BUN8 251 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 RHPN1-AS1Q9BWJ2 59 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 SMPXQ9UHP9 88 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 IGHV3-66A0A0C4DH42 116 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 M0R036 132 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 APOHP02749 345 aaPredicted RBP11.6□□□□□ -0.55
NCK1-201ENST00000288986 RPL7P18124 248 aaKnown RBP11.6□□□□□ -0.55
NCK1-201ENST00000288986 BTN1A1Q13410 526 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 ZNF674Q2M3X9 581 aa11.6□□□□□ -0.55
NCK1-201ENST00000288986 TRBV20OR9-2A0A075B6H5 130 aa11.59□□□□□ -0.55
NCK1-201ENST00000288986 B4DEV8 164 aa11.59□□□□□ -0.55
NCK1-201ENST00000288986 PRB2P02812 416 aaPredicted RBP11.59□□□□□ -0.55
NCK1-201ENST00000288986 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
NCK1-201ENST00000288986 PDE6HQ13956 83 aa11.59□□□□□ -0.55
NCK1-201ENST00000288986 C1orf194Q5T5A4 169 aa11.59□□□□□ -0.55
NCK1-201ENST00000288986 KPRPQ5T749 579 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms