RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 L7N2F9 121 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 COX7A2P2O60397 106 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 CXCL3P19876 107 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 TAS2R60P59551 318 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 PLP1P60201 277 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 VAMP2P63027 116 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 SLC38A11Q08AI6 406 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 CLINT1Q14677 625 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 Q6ZR54 194 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 RPUSD4Q96CM3 377 aaKnown RBP9.93□□□□□ -0.82
TPM1-202ENST00000288398 C16orf74Q96GX8 76 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 ARV1Q9H2C2 271 aa9.93□□□□□ -0.82
TPM1-202ENST00000288398 ZNF701M0R085 212 aaPredicted RBP9.92□□□□□ -0.82
TPM1-202ENST00000288398 CRXO43186 299 aaPredicted RBP9.92□□□□□ -0.82
TPM1-202ENST00000288398 TSC22D2O75157 780 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 CXCL2P19875 107 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 CDKN1BP46527 198 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 CCL18P55774 89 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 TAS2R30P59541 319 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 ZNF846Q147U1 533 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 LCN15Q6UWW0 184 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 CCDC28AQ8IWP9 274 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 C17orf77Q96MU5 243 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 SLC50A1Q9BRV3 221 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 SRRQ9GZT4 340 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 FLVCR2Q9UPI3 526 aa9.92□□□□□ -0.82
TPM1-202ENST00000288398 TIMM8BQ9Y5J9 83 aaPredicted RBP9.92□□□□□ -0.82
TPM1-202ENST00000288398 CBY3A6NI87 242 aa9.91□□□□□ -0.82
TPM1-202ENST00000288398 PRM2P04554 102 aa9.91□□□□□ -0.82
TPM1-202ENST00000288398 RAB31Q13636 194 aa9.91□□□□□ -0.82
TPM1-202ENST00000288398 CNPY1Q3B7I2 92 aa9.91□□□□□ -0.82
TPM1-202ENST00000288398 TMEM14EPQ6UXP3 125 aa9.91□□□□□ -0.82
TPM1-202ENST00000288398 LINC00305Q7Z4B0 112 aa9.91□□□□□ -0.82
TPM1-202ENST00000288398 BPIFA4PQ86YQ2 179 aa9.91□□□□□ -0.82
TPM1-202ENST00000288398 OR10J6PQ8NGY7 276 aa9.91□□□□□ -0.82
TPM1-202ENST00000288398 RBM38Q9H0Z9 239 aaKnown RBP9.91□□□□□ -0.82
TPM1-202ENST00000288398 PMS2P5A8MQ11 134 aa9.9□□□□□ -0.82
TPM1-202ENST00000288398 K7EPK0 472 aa9.9□□□□□ -0.82
TPM1-202ENST00000288398 CCNKO75909 580 aa9.9□□□□□ -0.82
TPM1-202ENST00000288398 BCAP31P51572 246 aa9.9□□□□□ -0.82
TPM1-202ENST00000288398 ZNF493Q6ZR52 646 aa9.9□□□□□ -0.82
TPM1-202ENST00000288398 ZBTB8BQ8NAP8 495 aaPredicted RBP9.9□□□□□ -0.82
TPM1-202ENST00000288398 GGACTQ9BVM4 153 aa9.9□□□□□ -0.82
TPM1-202ENST00000288398 H7BYZ3 331 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 AGPAT2O15120 278 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 AZU1P20160 251 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 FCN2Q15485 313 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 BAK1Q16611 211 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 C10orf113Q5VZT2 155 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 Q6ZRG5 221 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 TMEM263Q8WUH6 116 aaKnown RBP9.89□□□□□ -0.83
TPM1-202ENST00000288398 C20orf144Q9BQM9 153 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 NOP10Q9NPE3 64 aaKnown RBP9.89□□□□□ -0.83
TPM1-202ENST00000288398 PXMP4Q9Y6I8 212 aa9.89□□□□□ -0.83
TPM1-202ENST00000288398 KIAA1109Q2LD37 5005 aa9.88□□□□□ -0.83
TPM1-202ENST00000288398 FAM25EA8MYX2 175 aa9.88□□□□□ -0.83
TPM1-202ENST00000288398 ZNF331Q9NQX6 463 aaPredicted RBP9.88□□□□□ -0.83
TPM1-202ENST00000288398 NBDYA0A0U1RRE5 68 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 SNURFLB1AK76 121 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 SNRPCP09234 159 aaKnown RBP9.87□□□□□ -0.83
TPM1-202ENST00000288398 PVALBP20472 110 aaPredicted RBP9.87□□□□□ -0.83
TPM1-202ENST00000288398 CAMLGP49069 296 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 CAV2P51636 162 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 OR5I1Q13606 314 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 PATE2Q6UY27 113 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 C6orf223Q8N319 242 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 OR1L4Q8NGR5 311 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 MITD1Q8WV92 249 aa9.87□□□□□ -0.83
TPM1-202ENST00000288398 RCL1Q9Y2P8 373 aaKnown RBP9.87□□□□□ -0.83
TPM1-202ENST00000288398 LSM5Q9Y4Y9 91 aaKnown RBP9.87□□□□□ -0.83
TPM1-202ENST00000288398 PLAC8L1A1L4L8 177 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 C7orf66A4D0T2 115 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 C5orf51A6NDU8 294 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 MBPP02686 304 aaPredicted RBP9.86□□□□□ -0.83
TPM1-202ENST00000288398 RLN2P04090 185 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 PRB4P10163 310 aaPredicted RBP9.86□□□□□ -0.83
TPM1-202ENST00000288398 LEPP41159 167 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 GUK1Q16774 197 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 RNF141Q8WVD5 230 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 GNPNAT1Q96EK6 184 aaPredicted RBP9.86□□□□□ -0.83
TPM1-202ENST00000288398 PFDN5Q99471 154 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 FAT2Q9NYQ8 4349 aa9.86□□□□□ -0.83
TPM1-202ENST00000288398 C16orf90A8MZG2 172 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 H3BTX0 84 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 J3KRW8 73 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 IL7P13232 177 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 ZNF575Q86XF7 245 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 C12orf45Q8N5I9 185 aaPredicted RBP9.85□□□□□ -0.83
TPM1-202ENST00000288398 ZNRF2Q8NHG8 242 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 RNASE8Q8TDE3 154 aaKnown RBP9.85□□□□□ -0.83
TPM1-202ENST00000288398 MGST2Q99735 147 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 C20orf85Q9H1P6 137 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 DNAJC4Q9NNZ3 241 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 PKHD1P08F94 4074 aa9.85□□□□□ -0.83
TPM1-202ENST00000288398 DNAH2Q9P225 4427 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 PCLOQ9Y6V0 5065 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 CCSO14618 274 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 MRPS12O15235 138 aaKnown RBP9.84□□□□□ -0.83
TPM1-202ENST00000288398 M6PRP20645 277 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 ARL16Q0P5N6 197 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms