RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SPRR3Q9UBC9 169 aa7.06□□□□□ -1.28
SCUBE3-201ENST00000274938 SNRNP200O75643 2136 aaKnown RBP7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 IGLL1P15814 213 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 KIAA1217Q5T5P2 1943 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 DLEC1Q9Y238 1755 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 PSCAO43653 123 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 FOXL2NBQ6ZUU3 175 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 GGNQ86UU5 652 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 CDKN1BP46527 198 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 MORN5Q5VZ52 161 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 ZNF561-AS1K7EIQ3 104 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 SYNJ2BPP57105 145 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 RBM3P98179 157 aaKnown RBP7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 NKAPP1Q8N9T2 125 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 MESP1Q9BRJ9 268 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 PYGO2Q9BRQ0 406 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 C15orf53Q8NAA6 179 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 TRPM6Q9BX84 2022 aa7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 HEATR1Q9H583 2144 aaKnown RBP7.05□□□□□ -1.28
SCUBE3-201ENST00000274938 CFHR2P36980 270 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 NDPQ00604 133 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 FAM110DQ8TAY7 271 aaPredicted RBP7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 TMEM14CQ9P0S9 112 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 V9GYV3 84 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 A0A0G2JRQ6 117 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 F8VRH5 84 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 MRPL51Q4U2R6 128 aaKnown RBP7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 LINC01545Q5VT33 79 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 TRBV19A0A075B6N1 114 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 LYNX1G3V0Z9 82 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 LYNX1P0DP58 116 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 POU2AF1Q16633 256 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 NSUN5P1Q3KNT7 163 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 C20orf204Q6ZNR8 217 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 PIP4P2Q8N4L2 257 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 HS3ST6Q96QI5 342 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 LINC00527Q9UJ94 153 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 KNTC1P50748 2209 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 EFNA2O43921 213 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 C20orf78Q9BR46 151 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 B4DSR2 109 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 C9JQL5 133 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 F5P12259 2224 aa7.04□□□□□ -1.28
SCUBE3-201ENST00000274938 MCM3APO60318 1980 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 HERVK_113P63121 156 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 SDHAF1A6NFY7 115 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 NPYP01303 97 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 Q6ZRM9 215 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 ATG2BQ96BY7 2078 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 PINLYPA6NC86 204 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 K7EMI3 77 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 C11orf52Q96A22 123 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 SMIM2Q9BVW6 85 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 SCRT2Q9NQ03 307 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 SS18L2Q9UHA2 77 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 ADAMTS7Q9UKP4 1686 aa7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 ZFP36L1Q07352 338 aaKnown RBP7.03□□□□□ -1.28
SCUBE3-201ENST00000274938 J3QQQ9 107 aa7.02□□□□□ -1.28
SCUBE3-201ENST00000274938 IGFL4Q6B9Z1 124 aa7.02□□□□□ -1.28
SCUBE3-201ENST00000274938 KNL1Q8NG31 2342 aa7.02□□□□□ -1.28
SCUBE3-201ENST00000274938 LINC00479Q96M42 142 aa7.02□□□□□ -1.28
SCUBE3-201ENST00000274938 C12orf74Q32Q52 190 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 TMEM243Q9BU79 118 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 SPTBP11277 2137 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 IGKV1D-17A0A075B6S4 117 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 IGHV1OR15-1A0A075B7D0 117 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 LTBRP36941 435 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 CRYBA4P53673 196 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 ANKRD31Q8N7Z5 1873 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 H3BUX3 64 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 TMEM14BQ9NUH8 114 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 SIGLEC8Q9NYZ4 499 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 MRPL35Q9NZE8 188 aaKnown RBP7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 KLRD1Q13241 179 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 RPL35AP18077 110 aaKnown RBP7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 TMEM219Q86XT9 240 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 MSRB2Q9Y3D2 182 aa7.02□□□□□ -1.29
SCUBE3-201ENST00000274938 IGLC7A0M8Q6 106 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 PRB2P02812 416 aaPredicted RBP7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 CFC1BP0CG36 223 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 CFC1P0CG37 223 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 CSRP1P21291 193 aaKnown RBP7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 KLF5Q13887 457 aaPredicted RBP7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 A0A1B0GUS0 222 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 A0A1W2PPI3 338 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 H3BMG7 143 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 PFN2P35080 140 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 EPOPA6NHQ4 379 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 C8orf49Q96NF6 230 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 NDUFA4L2Q9NRX3 87 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 TRAV25A0A0B4J276 109 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 FOXG1P55316 489 aaPredicted RBP7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 PRR25Q96S07 402 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 UBR3Q6ZT12 1888 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 OVOL3O00110 214 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 PRSS57Q6UWY2 283 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 WIPF2Q8TF74 440 aaPredicted RBP7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 UBE2E2Q96LR5 201 aa7.01□□□□□ -1.29
SCUBE3-201ENST00000274938 RMI2Q96E14 147 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms