RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 FAM90A1Q86YD7 464 aa5.46□□□□□ -1.53
PDGFRA-201ENST00000257290 CNEP1R1Q8N9A8 125 aa5.46□□□□□ -1.53
PDGFRA-201ENST00000257290 Q96M66 194 aa5.46□□□□□ -1.53
PDGFRA-201ENST00000257290 OTORQ9NRC9 128 aa5.46□□□□□ -1.53
PDGFRA-201ENST00000257290 KLK5Q9Y337 293 aaPredicted RBP5.46□□□□□ -1.53
PDGFRA-201ENST00000257290 RPL18AQ02543 176 aaKnown RBP5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 Q8IYB0 196 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 SPAG17Q6Q759 2223 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A18PA6NE21 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A16PA6NEW6 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A20PA6NIJ5 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A7PA6NKC0 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A22PA8MWA6 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A12PA8MX19 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A5PA8MXJ8 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A23PA8MXZ1 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 DLL1O00548 723 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FOXS1O43638 330 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 LINC00271P0C7V0 271 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A15PP0C7V4 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A13PP0C7W8 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A14PP0C7W9 464 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 PRIMA1Q86XR5 153 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 TIMM17AQ99595 171 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 A0A1W2PR77 199 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 PIGYQ3MUY2 71 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 LINC01590Q5TEZ4 76 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 TM2D1Q9BX74 207 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 DEPPQ9NTK1 212 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 TSC2P49815 1807 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 GBF1Q92538 1859 aa5.46□□□□□ -1.54
PDGFRA-201ENST00000257290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 TRIP6Q15654 476 aaKnown RBP5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM104BQ5XKR9 115 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 SLC25A47Q6Q0C1 308 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM110DQ8TAY7 271 aaPredicted RBP5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 ZFP36L1Q07352 338 aaKnown RBP5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 DIAPH2-AS1Q14236 149 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 IGKV3D-7A0A0C4DH55 119 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 LGALS9O00182 355 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 LINC00596Q86U02 117 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 SLC25A45Q8N413 288 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 NDUFS5O43920 106 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 TCL1BO95988 128 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 VWCEQ96DN2 955 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 FSCN3Q9NQT6 498 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 NUP205Q92621 2012 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 TANC1Q9C0D5 1861 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 A0A1W2PNR3 127 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 C15orf62A8K5M9 175 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 FXYD7P58549 80 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 FGF12P61328 243 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 UBE2BP63146 152 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 EFNB3Q15768 340 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 LINC00173Q6ZV60 143 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 TMEM158Q8WZ71 300 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 DPH3Q96FX2 82 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 TRGV9Q99603 122 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 SLC25A16P16260 332 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 SERTAD4-AS1Q5TG53 156 aa5.45□□□□□ -1.54
PDGFRA-201ENST00000257290 IQCF6A8MYZ5 107 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 FUSP35637 526 aaKnown RBP eCLIP5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 TMEM200BQ69YZ2 307 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 METTL26Q96S19 204 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 DLL3Q9NYJ7 618 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 TRAV17A0A0B4J275 112 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 LIFP15018 202 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 DKK2Q9UBU2 259 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 ABCA7Q8IZY2 2146 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 NBL1P41271 181 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 SAP25Q8TEE9 199 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 IGHV1-45A0A0A0MS14 117 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 USP17L23D6RBM5 183 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 DEFB109BQ30KR1 87 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 APRG1Q8IVJ8 170 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 DEFB124Q8NES8 71 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 IL17DQ8TAD2 202 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 DOCK3Q8IZD9 2030 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 NYNRINQ9P2P1 1898 aaKnown RBP5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 TRAV26-2A0A0B4J265 109 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 NDUFS7O75251 213 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 BGLAPP02818 100 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 DEFB127Q9H1M4 99 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 TP53TG1Q9Y2A0 90 aa5.44□□□□□ -1.54
PDGFRA-201ENST00000257290 CFPP27918 469 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 TMEM14EPQ6UXP3 125 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 C2orf91Q6ZV80 131 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 MUSTN1Q8IVN3 82 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 C11orf52Q96A22 123 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 FANCD2OSQ96PS1 177 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 TM4SF5O14894 197 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 LYPD3O95274 346 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 IGLV3-21P80748 117 aaPredicted RBP5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 ZNF581Q9P0T4 197 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 TP53TG3Q9ULZ0 132 aa5.43□□□□□ -1.54
PDGFRA-201ENST00000257290 WNT9BO14905 357 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 PIFOQ8TCI5 191 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 TP73-AS1Q9UF72 201 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 FAM90A9PA6NNJ1 464 aa5.42□□□□□ -1.54
PDGFRA-201ENST00000257290 PATE3B3GLJ2 98 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms