RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 KCNIP2Q9NS61 270 aa11.79□□□□□ -0.52
CLPP-201ENST00000245816 SLC39A9Q9NUM3 307 aa11.79□□□□□ -0.52
CLPP-201ENST00000245816 DOK5Q9P104 306 aa11.79□□□□□ -0.52
CLPP-201ENST00000245816 ELOA3CA0A087WX78 387 aaPredicted RBP11.78□□□□□ -0.52
CLPP-201ENST00000245816 JTBO76095 146 aa11.78□□□□□ -0.52
CLPP-201ENST00000245816 RPL7P18124 248 aaKnown RBP11.78□□□□□ -0.52
CLPP-201ENST00000245816 B2MP61769 119 aa11.78□□□□□ -0.52
CLPP-201ENST00000245816 HSD17B11Q8NBQ5 300 aa11.78□□□□□ -0.52
CLPP-201ENST00000245816 RSG1Q9BU20 258 aa11.78□□□□□ -0.52
CLPP-201ENST00000245816 PXMP4Q9Y6I8 212 aa11.78□□□□□ -0.52
CLPP-201ENST00000245816 BCL2L11O43521 198 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 COX7A2P2O60397 106 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 NUTF2P61970 127 aaKnown RBP11.77□□□□□ -0.53
CLPP-201ENST00000245816 PRR20EP86478 221 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 PRR20CP86479 221 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 PRR20DP86480 221 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 PRR20BP86481 221 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 PRR20AP86496 221 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 SLC25A32Q9H2D1 315 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 SLC25A22Q9H936 323 aa11.77□□□□□ -0.53
CLPP-201ENST00000245816 CA1P00915 261 aaPredicted RBP11.76□□□□□ -0.53
CLPP-201ENST00000245816 NKX2-5P52952 324 aaPredicted RBP11.76□□□□□ -0.53
CLPP-201ENST00000245816 ACTL10Q5JWF8 245 aa11.76□□□□□ -0.53
CLPP-201ENST00000245816 FFAR4Q5NUL3 377 aa11.76□□□□□ -0.53
CLPP-201ENST00000245816 CEMP1Q6PRD7 247 aaPredicted RBP11.76□□□□□ -0.53
CLPP-201ENST00000245816 OR1L4Q8NGR5 311 aa11.76□□□□□ -0.53
CLPP-201ENST00000245816 ZNF471Q9BX82 626 aaPredicted RBP11.76□□□□□ -0.53
CLPP-201ENST00000245816 ARV1Q9H2C2 271 aa11.76□□□□□ -0.53
CLPP-201ENST00000245816 DNAJC4Q9NNZ3 241 aa11.76□□□□□ -0.53
CLPP-201ENST00000245816 CYTL1Q9NRR1 136 aa11.76□□□□□ -0.53
CLPP-201ENST00000245816 A0A087X0K7 114 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 KNCNA6PVL3 124 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 H3BMM0 161 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 HLA-DRB4P13762 266 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 C4BPBP20851 252 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 ATP6V0CP27449 155 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 EIF5AP63241 154 aaKnown RBP11.75□□□□□ -0.53
CLPP-201ENST00000245816 PATE2Q6UY27 113 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 FOXI2Q6ZQN5 318 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 GNPNAT1Q96EK6 184 aaPredicted RBP11.75□□□□□ -0.53
CLPP-201ENST00000245816 SCRT1Q9BWW7 348 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 C1QTNF4Q9BXJ3 329 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 SAV1Q9H4B6 383 aaPredicted RBP11.75□□□□□ -0.53
CLPP-201ENST00000245816 TIMM9Q9Y5J7 89 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 RFNGQ9Y644 331 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 HLA-DRB4X5D2U9 266 aa11.75□□□□□ -0.53
CLPP-201ENST00000245816 DNAH2Q9P225 4427 aa11.74□□□□□ -0.53
CLPP-201ENST00000245816 CXorf65A6NEN9 183 aa11.74□□□□□ -0.53
CLPP-201ENST00000245816 C10orf113Q5VZT2 155 aa11.74□□□□□ -0.53
CLPP-201ENST00000245816 C9orf62Q8N4C0 152 aa11.74□□□□□ -0.53
CLPP-201ENST00000245816 C16orf92Q96LL3 132 aa11.74□□□□□ -0.53
CLPP-201ENST00000245816 PFDN5Q99471 154 aa11.74□□□□□ -0.53
CLPP-201ENST00000245816 RARRES2Q99969 163 aa11.74□□□□□ -0.53
CLPP-201ENST00000245816 RPRMQ9NS64 109 aa11.74□□□□□ -0.53
CLPP-201ENST00000245816 DEFB4AO15263 64 aa11.73□□□□□ -0.53
CLPP-201ENST00000245816 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.73□□□□□ -0.53
CLPP-201ENST00000245816 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
CLPP-201ENST00000245816 OR2G3Q8NGZ4 309 aa11.73□□□□□ -0.53
CLPP-201ENST00000245816 TMEM37Q8WXS4 190 aa11.73□□□□□ -0.53
CLPP-201ENST00000245816 C17orf77Q96MU5 243 aa11.73□□□□□ -0.53
CLPP-201ENST00000245816 LINC00052Q96N35 136 aa11.73□□□□□ -0.53
CLPP-201ENST00000245816 UHRF2Q96PU4 802 aa11.73□□□□□ -0.53
CLPP-201ENST00000245816 DNAH17Q9UFH2 4485 aa11.72□□□□□ -0.53
CLPP-201ENST00000245816 NANOS2P60321 138 aaKnown RBP11.72□□□□□ -0.53
CLPP-201ENST00000245816 ACOT6Q3I5F7 207 aaPredicted RBP11.72□□□□□ -0.53
CLPP-201ENST00000245816 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
CLPP-201ENST00000245816 EBLN2Q6P2I7 272 aa11.72□□□□□ -0.53
CLPP-201ENST00000245816 BPIFA4PQ86YQ2 179 aa11.72□□□□□ -0.53
CLPP-201ENST00000245816 CSNK1G2-AS1Q8NCQ2 148 aa11.72□□□□□ -0.53
CLPP-201ENST00000245816 OR11H2Q8NH07 326 aa11.72□□□□□ -0.53
CLPP-201ENST00000245816 PSMG3Q9BT73 122 aaPredicted RBP11.72□□□□□ -0.53
CLPP-201ENST00000245816 SH3BGRL3Q9H299 93 aa11.72□□□□□ -0.53
CLPP-201ENST00000245816 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
CLPP-201ENST00000245816 HERC2O95714 4834 aa11.71□□□□□ -0.53
CLPP-201ENST00000245816 HECTD4Q9Y4D8 3996 aa11.71□□□□□ -0.53
CLPP-201ENST00000245816 ZNF705EA8MWA4 302 aaPredicted RBP11.71□□□□□ -0.53
CLPP-201ENST00000245816 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
CLPP-201ENST00000245816 LY6G6CO95867 125 aa11.71□□□□□ -0.53
CLPP-201ENST00000245816 TPT1P13693 172 aaKnown RBP11.71□□□□□ -0.53
CLPP-201ENST00000245816 SERF2P84101 59 aa11.71□□□□□ -0.53
CLPP-201ENST00000245816 RPP25LQ8N5L8 163 aaKnown RBP11.71□□□□□ -0.53
CLPP-201ENST00000245816 PHLDA1Q8WV24 401 aaPredicted RBP11.71□□□□□ -0.53
CLPP-201ENST00000245816 CLEC5AQ9NY25 188 aa11.71□□□□□ -0.53
CLPP-201ENST00000245816 FAT2Q9NYQ8 4349 aa11.71□□□□□ -0.53
CLPP-201ENST00000245816 A8MTW9 85 aa11.7□□□□□ -0.54
CLPP-201ENST00000245816 BOLA2-SMG1P6H3BVE0 249 aa11.7□□□□□ -0.54
CLPP-201ENST00000245816 MBP02144 154 aa11.7□□□□□ -0.54
CLPP-201ENST00000245816 M6PRP20645 277 aa11.7□□□□□ -0.54
CLPP-201ENST00000245816 FAM78BQ5VT40 261 aa11.7□□□□□ -0.54
CLPP-201ENST00000245816 SLC51BQ86UW2 128 aa11.7□□□□□ -0.54
CLPP-201ENST00000245816 BAP18Q8IXM2 172 aa11.7□□□□□ -0.54
CLPP-201ENST00000245816 A0A0J9YX75 114 aa11.69□□□□□ -0.54
CLPP-201ENST00000245816 A0A1W2PPV4 95 aa11.69□□□□□ -0.54
CLPP-201ENST00000245816 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
CLPP-201ENST00000245816 RBMY1A1P0DJD3 496 aaKnown RBP11.69□□□□□ -0.54
CLPP-201ENST00000245816 RBMY1CP0DJD4 496 aa11.69□□□□□ -0.54
CLPP-201ENST00000245816 MIFP14174 115 aa11.69□□□□□ -0.54
CLPP-201ENST00000245816 RBMY1FQ15415 496 aaKnown RBP11.69□□□□□ -0.54
CLPP-201ENST00000245816 GUK1Q16774 197 aa11.69□□□□□ -0.54
CLPP-201ENST00000245816 AKR1C8PQ5T2L2 129 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms