RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 BORCS7-ASMTA0A0B4J1R7 106 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 C3orf84H3BNL1 204 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 TAAR5O14804 337 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 SPP1P10451 314 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 ACTL10Q5JWF8 245 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 LCN15Q6UWW0 184 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 FOXI2Q6ZQN5 318 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 SLC50A1Q9BRV3 221 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 TNFSF18Q9UNG2 199 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 TP53TG1Q9Y2A0 90 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 TIMM9Q9Y5J7 89 aa8.33□□□□□ -1.08
SF3B6-201ENST00000233468 SACSQ9NZJ4 4579 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 SOCS3O14543 225 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 TAS2R45P59539 299 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 ACOT6Q3I5F7 207 aaPredicted RBP8.32□□□□□ -1.08
SF3B6-201ENST00000233468 Q5BKY6 102 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 FFAR4Q5NUL3 377 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 FAM78BQ5VT40 261 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 MUC7Q8TAX7 377 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 C1QTNF4Q9BXJ3 329 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 HRH4Q9H3N8 390 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 TMEM14CQ9P0S9 112 aa8.32□□□□□ -1.08
SF3B6-201ENST00000233468 KNCNA6PVL3 124 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
SF3B6-201ENST00000233468 MBP02144 154 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 HLA-DRB4P13762 266 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 RHOBP62745 196 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 ZNF124Q15973 351 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 TRPT1Q86TN4 253 aaKnown RBP8.31□□□□□ -1.08
SF3B6-201ENST00000233468 GNPNAT1Q96EK6 184 aaPredicted RBP8.31□□□□□ -1.08
SF3B6-201ENST00000233468 MFFQ9GZY8 342 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 SAV1Q9H4B6 383 aaPredicted RBP8.31□□□□□ -1.08
SF3B6-201ENST00000233468 FUT9Q9Y231 359 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 HLA-DRB4X5D2U9 266 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 EPPK1P58107 5090 aaKnown RBP8.31□□□□□ -1.08
SF3B6-201ENST00000233468 CSMD3Q7Z407 3707 aa8.31□□□□□ -1.08
SF3B6-201ENST00000233468 A0A1W2PPV4 95 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 H3BMM0 161 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 ARPC5O15511 151 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 SPRY2O43597 315 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 ZNF253O75346 499 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 JTBO76095 146 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 CA1P00915 261 aaPredicted RBP8.3□□□□□ -1.08
SF3B6-201ENST00000233468 HIST1H1EP10412 219 aaKnown RBP8.3□□□□□ -1.08
SF3B6-201ENST00000233468 M6PRP20645 277 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 SERF2P84101 59 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 PSG9Q00887 426 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 PDE6HQ13956 83 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 Q6ZNX1 250 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 CLUHP3Q96NS8 147 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 PSMG3Q9BT73 122 aaPredicted RBP8.3□□□□□ -1.08
SF3B6-201ENST00000233468 WFDC1Q9HC57 220 aa8.3□□□□□ -1.08
SF3B6-201ENST00000233468 RNF222A6NCQ9 220 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 HMSDA8MTL9 139 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 MRPS12O15235 138 aaKnown RBP8.29□□□□□ -1.08
SF3B6-201ENST00000233468 IGLC2P0DOY2 106 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 ZNF345Q14585 488 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 PSG3Q16557 428 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 KHDC3LQ587J8 217 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 GCSAMLQ5JQS6 135 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 HSD17B11Q8NBQ5 300 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 ZNF738Q8NE65 137 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 OR2G3Q8NGZ4 309 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 RNF183Q96D59 192 aa8.29□□□□□ -1.08
SF3B6-201ENST00000233468 TRAV5A0A0B4J249 113 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 A0A0D9SG52 128 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 EIF5AP63241 154 aaKnown RBP8.28□□□□□ -1.08
SF3B6-201ENST00000233468 DEFB135Q30KP9 77 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 MORN5Q5VZ52 161 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 MIR17HGQ75NE6 70 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 OR4B1Q8NGF8 309 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 IL17DQ8TAD2 202 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 OVOL2Q9BRP0 275 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 PAXXQ9BUH6 204 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 OR51M1Q9H341 326 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 AAMDCQ9H7C9 122 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 ZNF331Q9NQX6 463 aaPredicted RBP8.28□□□□□ -1.08
SF3B6-201ENST00000233468 PPP1R14DQ9NXH3 145 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 PRELID1Q9Y255 219 aa8.28□□□□□ -1.08
SF3B6-201ENST00000233468 LYSTQ99698 3801 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 TRBV19A0A075B6N1 114 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 TRAV8-2A0A0B4J237 113 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 A0A0J9YX75 114 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 KANTRA0A1W2PQU2 76 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 OR7C2O60412 319 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 AMBPP02760 352 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 ATP6V0CP27449 155 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 ZFAND6Q6FIF0 208 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 OR10G4Q8NGN3 311 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 OR10G9Q8NGN4 311 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 OR10G7Q8NGN6 311 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 MRPL53Q96EL3 112 aaKnown RBP8.27□□□□□ -1.09
SF3B6-201ENST00000233468 C17orf77Q96MU5 243 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 ARPC5LQ9BPX5 153 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 SLC25A2Q9BXI2 301 aa8.27□□□□□ -1.09
SF3B6-201ENST00000233468 STARD9Q9P2P6 4700 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 G3V3Q6 166 aa8.26□□□□□ -1.09
SF3B6-201ENST00000233468 H3BQ15 152 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms