RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 MITD1Q8WV92 249 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 ARV1Q9H2C2 271 aa11.17□□□□□ -0.62
ERCC1-201ENST00000013807 RCL1Q9Y2P8 373 aaKnown RBP11.17□□□□□ -0.62
ERCC1-201ENST00000013807 IGLV2-18A0A075B6J9 118 aa11.16□□□□□ -0.62
ERCC1-201ENST00000013807 AZU1P20160 251 aa11.16□□□□□ -0.62
ERCC1-201ENST00000013807 IAH1Q2TAA2 248 aaPredicted RBP11.16□□□□□ -0.62
ERCC1-201ENST00000013807 SOHLH1Q5JUK2 328 aa11.16□□□□□ -0.62
ERCC1-201ENST00000013807 TRIQKQ629K1 86 aa11.16□□□□□ -0.62
ERCC1-201ENST00000013807 BAP18Q8IXM2 172 aa11.16□□□□□ -0.62
ERCC1-201ENST00000013807 ZBTB8BQ8NAP8 495 aaPredicted RBP11.16□□□□□ -0.62
ERCC1-201ENST00000013807 ARL6Q9H0F7 186 aa11.16□□□□□ -0.62
ERCC1-201ENST00000013807 ZNF331Q9NQX6 463 aaPredicted RBP11.16□□□□□ -0.62
ERCC1-201ENST00000013807 DNAH11Q96DT5 4516 aa11.16□□□□□ -0.62
ERCC1-201ENST00000013807 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 C7orf66A4D0T2 115 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 CBY3A6NI87 242 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 CENPXA8MT69 81 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 CDKN1BP46527 198 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 INPP1P49441 399 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 RRAS2P62070 204 aaPredicted RBP11.15□□□□□ -0.62
ERCC1-201ENST00000013807 ARL16Q0P5N6 197 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 LCN15Q6UWW0 184 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 ZNF493Q6ZR52 646 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 ZNF546Q86UE3 836 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 MGAT4CQ9UBM8 478 aa11.15□□□□□ -0.62
ERCC1-201ENST00000013807 GOSR2O14653 212 aa11.14□□□□□ -0.63
ERCC1-201ENST00000013807 AGPAT2O15120 278 aa11.14□□□□□ -0.63
ERCC1-201ENST00000013807 ANXA7P20073 488 aaKnown RBP11.14□□□□□ -0.63
ERCC1-201ENST00000013807 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
ERCC1-201ENST00000013807 SLC38A11Q08AI6 406 aa11.14□□□□□ -0.63
ERCC1-201ENST00000013807 C1orf134Q5TEV5 83 aa11.14□□□□□ -0.63
ERCC1-201ENST00000013807 RPUSD4Q96CM3 377 aaKnown RBP11.14□□□□□ -0.63
ERCC1-201ENST00000013807 C16orf74Q96GX8 76 aa11.14□□□□□ -0.63
ERCC1-201ENST00000013807 SLC50A1Q9BRV3 221 aa11.14□□□□□ -0.63
ERCC1-201ENST00000013807 MBPP02686 304 aaPredicted RBP11.13□□□□□ -0.63
ERCC1-201ENST00000013807 ATP5G1P05496 136 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 DEFB130BP0DP73 79 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 DEFB130AP0DP74 79 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 ATP5G3P48201 142 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 RHOBP62745 196 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 BPIFA4PQ86YQ2 179 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 ZNRF2Q8NHG8 242 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 LRRC20Q8TCA0 184 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 RNASE8Q8TDE3 154 aaKnown RBP11.13□□□□□ -0.63
ERCC1-201ENST00000013807 TMEM37Q8WXS4 190 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 LINC01587Q99440 93 aa11.13□□□□□ -0.63
ERCC1-201ENST00000013807 TIMM8BQ9Y5J9 83 aaPredicted RBP11.13□□□□□ -0.63
ERCC1-201ENST00000013807 DYNC1H1Q14204 4646 aaKnown RBP11.13□□□□□ -0.63
ERCC1-201ENST00000013807 H7BYZ3 331 aa11.12□□□□□ -0.63
ERCC1-201ENST00000013807 IL7P13232 177 aa11.12□□□□□ -0.63
ERCC1-201ENST00000013807 LINC00612Q8N6U2 182 aa11.12□□□□□ -0.63
ERCC1-201ENST00000013807 TMEM263Q8WUH6 116 aaKnown RBP11.12□□□□□ -0.63
ERCC1-201ENST00000013807 SAT2Q96F10 170 aaPredicted RBP11.12□□□□□ -0.63
ERCC1-201ENST00000013807 PLA2G10O15496 165 aa11.11□□□□□ -0.63
ERCC1-201ENST00000013807 IGLC2P0DOY2 106 aa11.11□□□□□ -0.63
ERCC1-201ENST00000013807 FCN2Q15485 313 aa11.11□□□□□ -0.63
ERCC1-201ENST00000013807 MGST2Q99735 147 aa11.11□□□□□ -0.63
ERCC1-201ENST00000013807 C11orf1Q9H5F2 150 aa11.11□□□□□ -0.63
ERCC1-201ENST00000013807 PPP1R14DQ9NXH3 145 aa11.11□□□□□ -0.63
ERCC1-201ENST00000013807 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
ERCC1-201ENST00000013807 F5H768 121 aa11.1□□□□□ -0.63
ERCC1-201ENST00000013807 SCGB1D2O95969 90 aa11.1□□□□□ -0.63
ERCC1-201ENST00000013807 CHAC2Q8WUX2 184 aa11.1□□□□□ -0.63
ERCC1-201ENST00000013807 ODF3Q96PU9 254 aa11.1□□□□□ -0.63
ERCC1-201ENST00000013807 DNAJC4Q9NNZ3 241 aa11.1□□□□□ -0.63
ERCC1-201ENST00000013807 PXMP4Q9Y6I8 212 aa11.1□□□□□ -0.63
ERCC1-201ENST00000013807 NBDYA0A0U1RRE5 68 aa11.09□□□□□ -0.63
ERCC1-201ENST00000013807 LINC00854A0A1B0GVQ3 168 aa11.09□□□□□ -0.63
ERCC1-201ENST00000013807 GUK1Q16774 197 aa11.09□□□□□ -0.63
ERCC1-201ENST00000013807 VWC2Q2TAL6 325 aa11.09□□□□□ -0.63
ERCC1-201ENST00000013807 MORN5Q5VZ52 161 aa11.09□□□□□ -0.63
ERCC1-201ENST00000013807 C10orf113Q5VZT2 155 aa11.09□□□□□ -0.63
ERCC1-201ENST00000013807 ZNF503Q96F45 646 aa11.09□□□□□ -0.63
ERCC1-201ENST00000013807 ATG101Q9BSB4 218 aa11.09□□□□□ -0.63
ERCC1-201ENST00000013807 H3BQ15 152 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 COX7A2P2O60397 106 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 ZNF253O75346 499 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 CAMLGP49069 296 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 CCL18P55774 89 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 IL15RAQ13261 267 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 RAB31Q13636 194 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 KIR3DS1Q14943 382 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 OPCMLQ14982 345 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 Q6ZRG5 221 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 C20orf85Q9H1P6 137 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 WDR83OSQ9Y284 106 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 LINC00588Q9Y4M8 146 aa11.08□□□□□ -0.64
ERCC1-201ENST00000013807 PRAC2D3DTV9 90 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 H3BNG1 76 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 SLC17A3O00476 420 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 LYRM1O43325 122 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 TCRBP04435 133 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 GFI1BQ5VTD9 330 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 NRARPQ7Z6K4 114 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 OR10J6PQ8NGY7 276 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 RNF141Q8WVD5 230 aa11.07□□□□□ -0.64
ERCC1-201ENST00000013807 NOP10Q9NPE3 64 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms