RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 EDA2RQ9HAV5 297 aa19.61■□□□□ 0.73
VEGFA-231ENST00000640499 MRPS12O15235 138 aaKnown RBP19.6■□□□□ 0.73
VEGFA-231ENST00000640499 FGF7P21781 194 aa19.6■□□□□ 0.73
VEGFA-231ENST00000640499 RPL29P47914 159 aaKnown RBP19.6■□□□□ 0.73
VEGFA-231ENST00000640499 APOC4P55056 127 aa19.6■□□□□ 0.73
VEGFA-231ENST00000640499 DEFB1P60022 68 aa19.6■□□□□ 0.73
VEGFA-231ENST00000640499 CLINT1Q14677 625 aa19.6■□□□□ 0.73
VEGFA-231ENST00000640499 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.6■□□□□ 0.73
VEGFA-231ENST00000640499 THAP6Q8TBB0 222 aa19.6■□□□□ 0.73
VEGFA-231ENST00000640499 RAB31Q13636 194 aa19.59■□□□□ 0.73
VEGFA-231ENST00000640499 TRPT1Q86TN4 253 aaKnown RBP19.59■□□□□ 0.73
VEGFA-231ENST00000640499 HSPB11Q9Y547 144 aa19.59■□□□□ 0.73
VEGFA-231ENST00000640499 GIG44P09565 113 aaPredicted RBP19.58■□□□□ 0.72
VEGFA-231ENST00000640499 PET100P0DJ07 73 aa19.58■□□□□ 0.72
VEGFA-231ENST00000640499 RPL12P30050 165 aaKnown RBP19.58■□□□□ 0.72
VEGFA-231ENST00000640499 GALR1P47211 349 aa19.58■□□□□ 0.72
VEGFA-231ENST00000640499 Q6ZWC4 215 aa19.58■□□□□ 0.72
VEGFA-231ENST00000640499 C20orf173Q96LM9 149 aa19.58■□□□□ 0.72
VEGFA-231ENST00000640499 NPCDR1Q9BY65 106 aa19.58■□□□□ 0.72
VEGFA-231ENST00000640499 CSTL1Q9H114 145 aa19.58■□□□□ 0.72
VEGFA-231ENST00000640499 SLC39A9Q9NUM3 307 aa19.58■□□□□ 0.72
VEGFA-231ENST00000640499 UBE2CO00762 179 aa19.57■□□□□ 0.72
VEGFA-231ENST00000640499 SNRPD3P62318 126 aaKnown RBP19.57■□□□□ 0.72
VEGFA-231ENST00000640499 DEFB135Q30KP9 77 aa19.57■□□□□ 0.72
VEGFA-231ENST00000640499 ACTL10Q5JWF8 245 aa19.57■□□□□ 0.72
VEGFA-231ENST00000640499 LINC00305Q7Z4B0 112 aa19.57■□□□□ 0.72
VEGFA-231ENST00000640499 GPR82Q96P67 336 aa19.57■□□□□ 0.72
VEGFA-231ENST00000640499 DNAJC4Q9NNZ3 241 aa19.57■□□□□ 0.72
VEGFA-231ENST00000640499 TRAV8-2A0A0B4J237 113 aa19.56■□□□□ 0.72
VEGFA-231ENST00000640499 GDF5OSQ5U4N7 250 aa19.56■□□□□ 0.72
VEGFA-231ENST00000640499 WFDC1Q9HC57 220 aa19.56■□□□□ 0.72
VEGFA-231ENST00000640499 PXMP4Q9Y6I8 212 aa19.56■□□□□ 0.72
VEGFA-231ENST00000640499 ELOA3CA0A087WX78 387 aaPredicted RBP19.55■□□□□ 0.72
VEGFA-231ENST00000640499 COX7A2P2O60397 106 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 MPDU1O75352 247 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 S100A7P31151 101 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 PSMB3P49720 205 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 B2MP61769 119 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 C10orf113Q5VZT2 155 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 STHQ8IWL8 128 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 RNF183Q96D59 192 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 LINC00052Q96N35 136 aa19.55■□□□□ 0.72
VEGFA-231ENST00000640499 WDR61Q9GZS3 305 aaKnown RBP19.55■□□□□ 0.72
VEGFA-231ENST00000640499 TRAV5A0A0B4J249 113 aa19.54■□□□□ 0.72
VEGFA-231ENST00000640499 ISLRO14498 428 aa19.54■□□□□ 0.72
VEGFA-231ENST00000640499 GIPP09681 153 aaPredicted RBP19.54■□□□□ 0.72
VEGFA-231ENST00000640499 RPL7P18124 248 aaKnown RBP19.54■□□□□ 0.72
VEGFA-231ENST00000640499 IGFL4Q6B9Z1 124 aa19.54■□□□□ 0.72
VEGFA-231ENST00000640499 Q6ZRG5 221 aa19.54■□□□□ 0.72
VEGFA-231ENST00000640499 SMIM3Q9BZL3 60 aa19.54■□□□□ 0.72
VEGFA-231ENST00000640499 H3BMM0 161 aa19.53■□□□□ 0.72
VEGFA-231ENST00000640499 SPRY2O43597 315 aa19.53■□□□□ 0.72
VEGFA-231ENST00000640499 GCSAMLQ5JQS6 135 aa19.53■□□□□ 0.72
VEGFA-231ENST00000640499 ATP5SQ99766 215 aa19.53■□□□□ 0.72
VEGFA-231ENST00000640499 TP53TG1Q9Y2A0 90 aa19.53■□□□□ 0.72
VEGFA-231ENST00000640499 A0A087X0K7 114 aa19.52■□□□□ 0.72
VEGFA-231ENST00000640499 ID1P41134 155 aa19.52■□□□□ 0.72
VEGFA-231ENST00000640499 MEOX2P50222 304 aa19.52■□□□□ 0.72
VEGFA-231ENST00000640499 C16orf92Q96LL3 132 aa19.52■□□□□ 0.72
VEGFA-231ENST00000640499 G3V3Q6 166 aa19.51■□□□□ 0.71
VEGFA-231ENST00000640499 C4BPBP20851 252 aa19.51■□□□□ 0.71
VEGFA-231ENST00000640499 SAV1Q9H4B6 383 aaPredicted RBP19.51■□□□□ 0.71
VEGFA-231ENST00000640499 F6UB75 175 aa19.5■□□□□ 0.71
VEGFA-231ENST00000640499 SNRPCP09234 159 aaKnown RBP19.5■□□□□ 0.71
VEGFA-231ENST00000640499 HLA-DRB4P13762 266 aa19.5■□□□□ 0.71
VEGFA-231ENST00000640499 OR1L4Q8NGR5 311 aa19.5■□□□□ 0.71
VEGFA-231ENST00000640499 RFNGQ9Y644 331 aa19.5■□□□□ 0.71
VEGFA-231ENST00000640499 HLA-DRB4X5D2U9 266 aa19.5■□□□□ 0.71
VEGFA-231ENST00000640499 CA1P00915 261 aaPredicted RBP19.49■□□□□ 0.71
VEGFA-231ENST00000640499 ATF4P18848 351 aaPredicted RBP19.49■□□□□ 0.71
VEGFA-231ENST00000640499 HLA-DMBP28068 263 aa19.49■□□□□ 0.71
VEGFA-231ENST00000640499 FGL1Q08830 312 aa19.49■□□□□ 0.71
VEGFA-231ENST00000640499 S100A7AQ86SG5 101 aa19.49■□□□□ 0.71
VEGFA-231ENST00000640499 RNF182Q8N6D2 247 aa19.49■□□□□ 0.71
VEGFA-231ENST00000640499 ASB13Q8WXK3 278 aa19.49■□□□□ 0.71
VEGFA-231ENST00000640499 SAMD13Q5VXD3 122 aa19.48■□□□□ 0.71
VEGFA-231ENST00000640499 GATAD1Q8WUU5 269 aa19.48■□□□□ 0.71
VEGFA-231ENST00000640499 PFDN5Q99471 154 aa19.48■□□□□ 0.71
VEGFA-231ENST00000640499 H3BQ15 152 aa19.47■□□□□ 0.71
VEGFA-231ENST00000640499 IGLC2P0DOY2 106 aa19.47■□□□□ 0.71
VEGFA-231ENST00000640499 SPP1P10451 314 aa19.47■□□□□ 0.71
VEGFA-231ENST00000640499 FOXI2Q6ZQN5 318 aa19.47■□□□□ 0.71
VEGFA-231ENST00000640499 AQP10Q96PS8 301 aa19.47■□□□□ 0.71
VEGFA-231ENST00000640499 SPATA31B1PQ5VZV4 182 aa19.46■□□□□ 0.71
VEGFA-231ENST00000640499 MORN3Q6PF18 240 aaPredicted RBP19.46■□□□□ 0.71
VEGFA-231ENST00000640499 CSNK1G2-AS1Q8NCQ2 148 aa19.46■□□□□ 0.71
VEGFA-231ENST00000640499 RNF24Q9Y225 148 aa19.46■□□□□ 0.71
VEGFA-231ENST00000640499 A0A0J9YX75 114 aa19.45■□□□□ 0.7
VEGFA-231ENST00000640499 H3BTX0 84 aa19.45■□□□□ 0.7
VEGFA-231ENST00000640499 BPIFA4PQ86YQ2 179 aa19.45■□□□□ 0.7
VEGFA-231ENST00000640499 MUC7Q8TAX7 377 aa19.45■□□□□ 0.7
VEGFA-231ENST00000640499 PARD6GQ9BYG4 376 aaPredicted RBP19.45■□□□□ 0.7
VEGFA-231ENST00000640499 STARD9Q9P2P6 4700 aa19.45■□□□□ 0.7
VEGFA-231ENST00000640499 SLC17A3O00476 420 aa19.44■□□□□ 0.7
VEGFA-231ENST00000640499 OR2T35Q8NGX2 323 aa19.44■□□□□ 0.7
VEGFA-231ENST00000640499 SAT2Q96F10 170 aaPredicted RBP19.44■□□□□ 0.7
VEGFA-231ENST00000640499 FAM167A-AS1Q96KT0 104 aa19.44■□□□□ 0.7
VEGFA-231ENST00000640499 RPRMQ9NS64 109 aa19.44■□□□□ 0.7
VEGFA-231ENST00000640499 CLEC5AQ9NY25 188 aa19.44■□□□□ 0.7
VEGFA-231ENST00000640499 IGKV3-20P01619 116 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 366.8 ms