RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-215	ENST00000639487	LYRM2	Q9NU23	88 aa	Predicted RBP	4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	IGKV1D-8	A0A087WSZ0	117 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	MAP1LC3B2	A6NCE7	125 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	TMEM50A	O95807	157 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	NPY1R	P25929	384 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	HINT1	P49773	126 aa	Predicted RBP	4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	C9orf66	Q5T8R8	295 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	ZNF818P	Q6ZRF7	136 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	LFNG	Q8NES3	379 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	OR1L1	Q8NH94	360 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	ZNF503	Q96F45	646 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	SPAG8	Q99932	426 aa	Predicted RBP	4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	MAP1LC3B	Q9GZQ8	125 aa		4.98	□□□□□ -1.61
RTTN-215	ENST00000639487	HECTD4	Q9Y4D8	3996 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487		H7BYZ3	331 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	CT83	Q5H943	113 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	AMMECR1L	Q6DCA0	310 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	C11orf87	Q6NUJ2	197 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	ZNF826P	Q6ZT77	177 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487		Q8WTZ3	238 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	RNF141	Q8WVD5	230 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	ANAPC13	Q9BS18	74 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	KLK15	Q9H2R5	256 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	PAM16	Q9Y3D7	125 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487		V9GYY9	64 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	DNAH2	Q9P225	4427 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	DOCK11	Q5JSL3	2073 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	TEX50	A0A1B0GTY4	177 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	C13orf42	A0A1B0GVH6	325 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	LINC00473	A8K010	186 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487		H3BSH0	61 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	DHRS2	Q13268	280 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	TMEM183B	Q1AE95	376 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	CD300E	Q496F6	205 aa	Predicted RBP	4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	C6orf201	Q7Z4U5	140 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	OR4A16	Q8NH70	328 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	ARPC1A	Q92747	370 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	C1QTNF4	Q9BXJ3	329 aa		4.97	□□□□□ -1.61
RTTN-215	ENST00000639487	UMAD1	C9J7I0	102 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	GNB3	P16520	340 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	C4orf48	Q5BLP8	95 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	SOHLH1	Q5JUK2	328 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	FA2H	Q7L5A8	372 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	ZNRF1	Q8ND25	227 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	BAALC	Q8WXS3	180 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	TMEM18	Q96B42	140 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	TM2D3	Q9BRN9	247 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	MRPL20	Q9BYC9	149 aa	Known RBP	4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	PLA2G2E	Q9NZK7	142 aa		4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	MAP1B	P46821	2468 aa	Known RBP	4.96	□□□□□ -1.61
RTTN-215	ENST00000639487	HIVEP3	Q5T1R4	2406 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	IGKV1D-13	A0A0B4J2D9	117 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	ZFP92	A6NM28	416 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487		K7EIM0	57 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	SCT	P09683	121 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	SMIM17	P0DL12	118 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	IGKV1-13	P0DP09	117 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	TPT1	P13693	172 aa	Known RBP	4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	PSMB3	P49720	205 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	HNRNPA3	P51991	378 aa	Known RBP	4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	CCL17	Q92583	94 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	C2orf50	Q96LR7	162 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	CTDSP1	Q9GZU7	261 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	VAX2	Q9UIW0	290 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	GPR179	Q6PRD1	2367 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487		H3BQ15	152 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	NXPH4	O95158	308 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	ORM1	P02763	201 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	OPRK1	P41145	380 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	NKX2-1	P43699	371 aa	Predicted RBP	4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	SUB1	P53999	127 aa	Known RBP eCLIP	4.96	□□□□□ -1.62
RTTN-215	ENST00000639487		Q6ZRG5	221 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	INO80E	Q8NBZ0	244 aa	Predicted RBP	4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	CYTL1	Q9NRR1	136 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	IL36RN	Q9UBH0	155 aa		4.96	□□□□□ -1.62
RTTN-215	ENST00000639487	TRAV41	A0A0B4J266	112 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	MPIG6B	O95866	241 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	GRP	P07492	148 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	CRISP2	P16562	243 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	MEF2B	Q02080	365 aa	Predicted RBP	4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	TIGIT	Q495A1	244 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	VAMP8	Q9BV40	100 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487		M0QYG6	137 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	CSN3	P07498	182 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	CD33	P20138	364 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	RHOB	P62745	196 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	NEGR1	Q7Z3B1	354 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	EIF5A2	Q9GZV4	153 aa	Known RBP	4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	ELL3	Q9HB65	397 aa	Predicted RBP	4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	PRR13	Q9NZ81	148 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	KIAA1456	Q9P272	454 aa		4.95	□□□□□ -1.62
RTTN-215	ENST00000639487	IGKV1D-37	A0A075B6S9	117 aa		4.94	□□□□□ -1.62
RTTN-215	ENST00000639487		B4DEV8	164 aa		4.94	□□□□□ -1.62
RTTN-215	ENST00000639487	TMEM170A	Q8WVE7	144 aa		4.94	□□□□□ -1.62
RTTN-215	ENST00000639487	EEF1AKMT3	Q96AZ1	226 aa		4.94	□□□□□ -1.62
RTTN-215	ENST00000639487	OR2T8	A6NH00	312 aa		4.94	□□□□□ -1.62
RTTN-215	ENST00000639487		H3BRN7	92 aa		4.94	□□□□□ -1.62
RTTN-215	ENST00000639487	NDUFS7	O75251	213 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms