RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 HAGHQ16775 308 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 SAMD13Q5VXD3 122 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 FAM24BQ8N5W8 94 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 THAP6Q8TBB0 222 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 CHAC2Q8WUX2 184 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 SPATA25Q9BR10 227 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 SHANK2-AS3Q9BTD1 123 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 SCRT1Q9BWW7 348 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 SLC25A39Q9BZJ4 359 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 ARL6Q9H0F7 186 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 SLC25A32Q9H2D1 315 aa11.98□□□□□ -0.49
CACNA1A-229ENST00000636670 OR5G3P0C626 314 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 ZNF688P0C7X2 276 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 RPL12P30050 165 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 GALR1P47211 349 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 RPL29P47914 159 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 MEOX2P50222 304 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 DEFB131AP59861 70 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 PRR20EP86478 221 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 PRR20CP86479 221 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 PRR20DP86480 221 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 PRR20BP86481 221 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 PRR20AP86496 221 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 IL17DQ8TAD2 202 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 ARV1Q9H2C2 271 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 SLC25A22Q9H936 323 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 KCNIP2Q9NS61 270 aa11.97□□□□□ -0.49
CACNA1A-229ENST00000636670 ELOA3CA0A087WX78 387 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 COX7A2P2O60397 106 aa11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 APOC4P55056 127 aa11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 SNRPD3P62318 126 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 CLINT1Q14677 625 aa11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 APRG1Q8IVJ8 170 aa11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 PFDN5Q99471 154 aa11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 ATP5SQ99766 215 aa11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 NPCDR1Q9BY65 106 aa11.96□□□□□ -0.49
CACNA1A-229ENST00000636670 AGRNO00468 2067 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 KIR2DL5BA0A0G2JN68 375 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 KIR2DL5BA0A0G2JPC4 375 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 RPL7P18124 248 aaKnown RBP11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 PSMB3P49720 205 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 B2MP61769 119 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 MIC13Q5XKP0 118 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 PATE2Q6UY27 113 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 Q6ZRG5 221 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 KIR2DL5AQ8N109 375 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 OR1L4Q8NGR5 311 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 KIR2DL5BQ8NHK3 375 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 GATAD1Q8WUU5 269 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 UHRF2Q96PU4 802 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 PXMP4Q9Y6I8 212 aa11.95□□□□□ -0.5
CACNA1A-229ENST00000636670 SOCS3O14543 225 aa11.94□□□□□ -0.5
CACNA1A-229ENST00000636670 ZNF124Q15973 351 aa11.94□□□□□ -0.5
CACNA1A-229ENST00000636670 WDR61Q9GZS3 305 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-229ENST00000636670 SLC39A9Q9NUM3 307 aa11.94□□□□□ -0.5
CACNA1A-229ENST00000636670 ISLRO14498 428 aa11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 ID1P41134 155 aa11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 PSMG4Q5JS54 123 aa11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 C10orf113Q5VZT2 155 aa11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 LEMD1Q68G75 181 aa11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 LINC00305Q7Z4B0 112 aa11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 LINC00476Q8WZB0 136 aa11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 AQP10Q96PS8 301 aa11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 PARD6GQ9BYG4 376 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-229ENST00000636670 HECTD4Q9Y4D8 3996 aa11.92□□□□□ -0.5
CACNA1A-229ENST00000636670 A0A087X0K7 114 aa11.92□□□□□ -0.5
CACNA1A-229ENST00000636670 C17orf112F2Z3M2 114 aa11.92□□□□□ -0.5
CACNA1A-229ENST00000636670 UBE2CO00762 179 aa11.92□□□□□ -0.5
CACNA1A-229ENST00000636670 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-229ENST00000636670 TMEM37Q8WXS4 190 aa11.92□□□□□ -0.5
CACNA1A-229ENST00000636670 IFNA5P01569 189 aa11.91□□□□□ -0.5
CACNA1A-229ENST00000636670 RPL35AP18077 110 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-229ENST00000636670 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.91□□□□□ -0.5
CACNA1A-229ENST00000636670 STHQ8IWL8 128 aa11.91□□□□□ -0.5
CACNA1A-229ENST00000636670 ZNF709Q8N972 641 aa11.91□□□□□ -0.5
CACNA1A-229ENST00000636670 OR2T35Q8NGX2 323 aa11.91□□□□□ -0.5
CACNA1A-229ENST00000636670 SMIM3Q9BZL3 60 aa11.91□□□□□ -0.5
CACNA1A-229ENST00000636670 DNAJC4Q9NNZ3 241 aa11.91□□□□□ -0.5
CACNA1A-229ENST00000636670 MRPS12O15235 138 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-229ENST00000636670 CXCL2P19875 107 aa11.9□□□□□ -0.5
CACNA1A-229ENST00000636670 Q6ZWC4 215 aa11.9□□□□□ -0.5
CACNA1A-229ENST00000636670 TRPT1Q86TN4 253 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-229ENST00000636670 BPIFA4PQ86YQ2 179 aa11.9□□□□□ -0.5
CACNA1A-229ENST00000636670 C17orf77Q96MU5 243 aa11.9□□□□□ -0.5
CACNA1A-229ENST00000636670 RSG1Q9BU20 258 aa11.9□□□□□ -0.5
CACNA1A-229ENST00000636670 TP53TG1Q9Y2A0 90 aa11.9□□□□□ -0.5
CACNA1A-229ENST00000636670 LY6G6CO95867 125 aa11.89□□□□□ -0.51
CACNA1A-229ENST00000636670 ZNF266Q14584 549 aa11.89□□□□□ -0.51
CACNA1A-229ENST00000636670 C16orf92Q96LL3 132 aa11.89□□□□□ -0.51
CACNA1A-229ENST00000636670 RETNQ9HD89 108 aa11.89□□□□□ -0.51
CACNA1A-229ENST00000636670 FXYD6-FXYD2A0A087WZ82 144 aa11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 KNCNA6PVL3 124 aa11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 G3V3Q6 166 aa11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 SPP1P10451 314 aa11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 HLA-DRB4P13762 266 aa11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 Q5BKY6 102 aa11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 ACTL10Q5JWF8 245 aa11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 MORN5Q5VZ52 161 aa11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 MORN3Q6PF18 240 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-229ENST00000636670 LCN15Q6UWW0 184 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms