RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 HYDINQ4G0P3 5121 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 FAM25EA8MYX2 175 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 C11orf94C9JXX5 98 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 K7EPK0 472 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 DEDDO75618 318 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 LY6G6CO95867 125 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 LINC00869P0C866 280 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 RBMY1A1P0DJD3 496 aaKnown RBP13.24□□□□□ -0.29
CLN6-210ENST00000635747 RBMY1CP0DJD4 496 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 RBMY1FQ15415 496 aaKnown RBP13.24□□□□□ -0.29
CLN6-210ENST00000635747 PXDC1Q5TGL8 231 aa13.24□□□□□ -0.29
CLN6-210ENST00000635747 SLC25A39Q9BZJ4 359 aaPredicted RBP13.24□□□□□ -0.29
CLN6-210ENST00000635747 INMT-MINDY4F8WBC2 141 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 H3BRN7 92 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 CCSO14618 274 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 CCNKO75909 580 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 RPL7P18124 248 aaKnown RBP13.23□□□□□ -0.29
CLN6-210ENST00000635747 PVALBP20472 110 aaPredicted RBP13.23□□□□□ -0.29
CLN6-210ENST00000635747 TCTAP57738 103 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 GDF5OSQ5U4N7 250 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 OR4B1Q8NGF8 309 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 C2CD4CQ8TF44 421 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 C2orf50Q96LR7 162 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 SEC22CQ9BRL7 303 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 SHANK2-AS3Q9BTD1 123 aa13.23□□□□□ -0.29
CLN6-210ENST00000635747 GOSR2O14653 212 aa13.22□□□□□ -0.29
CLN6-210ENST00000635747 IGKV3-20P01619 116 aa13.22□□□□□ -0.29
CLN6-210ENST00000635747 OR5G3P0C626 314 aa13.22□□□□□ -0.29
CLN6-210ENST00000635747 PSG9Q00887 426 aa13.22□□□□□ -0.29
CLN6-210ENST00000635747 ZNF546Q86UE3 836 aa13.22□□□□□ -0.29
CLN6-210ENST00000635747 NEU1Q99519 415 aa13.22□□□□□ -0.29
CLN6-210ENST00000635747 GPN1Q9HCN4 374 aaPredicted RBP13.22□□□□□ -0.29
CLN6-210ENST00000635747 DOK5Q9P104 306 aa13.22□□□□□ -0.29
CLN6-210ENST00000635747 LSM5Q9Y4Y9 91 aaKnown RBP13.22□□□□□ -0.29
CLN6-210ENST00000635747 A0A0J9YX75 114 aa13.21□□□□□ -0.29
CLN6-210ENST00000635747 SMIM9A6NGZ8 99 aa13.21□□□□□ -0.29
CLN6-210ENST00000635747 BCAP31P51572 246 aa13.21□□□□□ -0.29
CLN6-210ENST00000635747 OXA1LQ15070 435 aa13.21□□□□□ -0.29
CLN6-210ENST00000635747 GSG1LQ6UXU4 331 aa13.21□□□□□ -0.29
CLN6-210ENST00000635747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.21□□□□□ -0.29
CLN6-210ENST00000635747 SCRT1Q9BWW7 348 aa13.21□□□□□ -0.29
CLN6-210ENST00000635747 ARL6Q9H0F7 186 aa13.21□□□□□ -0.29
CLN6-210ENST00000635747 TMEM189A5PLL7 270 aa13.2□□□□□ -0.3
CLN6-210ENST00000635747 CAV2P51636 162 aa13.2□□□□□ -0.3
CLN6-210ENST00000635747 RAB31Q13636 194 aa13.2□□□□□ -0.3
CLN6-210ENST00000635747 FAM78BQ5VT40 261 aa13.2□□□□□ -0.3
CLN6-210ENST00000635747 ZNF705AQ6ZN79 300 aaPredicted RBP13.2□□□□□ -0.3
CLN6-210ENST00000635747 ELOA3CA0A087WX78 387 aaPredicted RBP13.19□□□□□ -0.3
CLN6-210ENST00000635747 AGPAT2O15120 278 aa13.19□□□□□ -0.3
CLN6-210ENST00000635747 DUSP14O95147 198 aaKnown RBP13.19□□□□□ -0.3
CLN6-210ENST00000635747 HLA-DMBP28068 263 aa13.19□□□□□ -0.3
CLN6-210ENST00000635747 DEFB1P60022 68 aa13.19□□□□□ -0.3
CLN6-210ENST00000635747 FGL1Q08830 312 aa13.19□□□□□ -0.3
CLN6-210ENST00000635747 SLC38A11Q08AI6 406 aa13.19□□□□□ -0.3
CLN6-210ENST00000635747 ARL16Q0P5N6 197 aa13.19□□□□□ -0.3
CLN6-210ENST00000635747 LGALS9CQ6DKI2 356 aa13.19□□□□□ -0.3
CLN6-210ENST00000635747 C20orf173Q96LM9 149 aa13.19□□□□□ -0.3
CLN6-210ENST00000635747 A0A087X0K7 114 aa13.18□□□□□ -0.3
CLN6-210ENST00000635747 TRAV10A0A0B4J240 114 aa13.18□□□□□ -0.3
CLN6-210ENST00000635747 ZNF705FA8MVS1 300 aaPredicted RBP13.18□□□□□ -0.3
CLN6-210ENST00000635747 F6UB75 175 aa13.18□□□□□ -0.3
CLN6-210ENST00000635747 ZNF705DP0CH99 300 aaPredicted RBP13.18□□□□□ -0.3
CLN6-210ENST00000635747 ZNF705BP0CI00 300 aaPredicted RBP13.18□□□□□ -0.3
CLN6-210ENST00000635747 ZNF709Q8N972 641 aa13.18□□□□□ -0.3
CLN6-210ENST00000635747 C17orf77Q96MU5 243 aa13.18□□□□□ -0.3
CLN6-210ENST00000635747 ARV1Q9H2C2 271 aa13.18□□□□□ -0.3
CLN6-210ENST00000635747 GOLT1BQ9Y3E0 138 aa13.18□□□□□ -0.3
CLN6-210ENST00000635747 A8MTW9 85 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 AMBPP02760 352 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 S100A11P31949 105 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 FXYD7P58549 80 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 PATE2Q6UY27 113 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 LRRC20Q8TCA0 184 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 UHRF2Q96PU4 802 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 SLC35B3Q9H1N7 401 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 RFNGQ9Y644 331 aa13.17□□□□□ -0.3
CLN6-210ENST00000635747 IGLL5B9A064 214 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 COX7A2P2O60397 106 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 CST7O76096 145 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 S100A10P60903 97 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 HBG1P69891 147 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 HBG2P69892 147 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 Q6ZRG5 221 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 LINC00305Q7Z4B0 112 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 STX12Q86Y82 276 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 C11orf1Q9H5F2 150 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 LYRM2Q9NU23 88 aaPredicted RBP13.16□□□□□ -0.3
CLN6-210ENST00000635747 UQCC1Q9NVA1 299 aa13.16□□□□□ -0.3
CLN6-210ENST00000635747 IGHV3OR16-12A0A075B7B8 117 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 TEX48A0A1B0GUV7 120 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 FAM24AA6NFZ4 105 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 CXCL2P19875 107 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 CAMLGP49069 296 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 SULT1A1P50225 295 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 IL15RAQ13261 267 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 Q6ZTC4 211 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 BPIFA4PQ86YQ2 179 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 ZNF738Q8NE65 137 aa13.15□□□□□ -0.3
CLN6-210ENST00000635747 MGST2Q99735 147 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms